RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 NAALADL1Q9UQQ1 740 aa17.34■□□□□ 0.37
PTPN6-210ENST00000538318 TMEM131Q92545 1883 aa17.33■□□□□ 0.37
PTPN6-210ENST00000538318 ANKRD11Q6UB99 2663 aaPredicted RBP17.33■□□□□ 0.36
PTPN6-210ENST00000538318 TYW5A2RUC4 315 aaKnown RBP17.33■□□□□ 0.36
PTPN6-210ENST00000538318 TAF4O00268 1085 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 FLRT2O43155 660 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 SART1O43290 800 aaKnown RBP17.33■□□□□ 0.36
PTPN6-210ENST00000538318 GNA14O95837 355 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 ASLP04424 464 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 CD27P26842 260 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 CSKP41240 450 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 MARSP56192 900 aaKnown RBP17.33■□□□□ 0.36
PTPN6-210ENST00000538318 MORC3Q14149 939 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 ARID5BQ14865 1188 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 TEAD4Q15561 434 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 MEA1Q16626 185 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 HNRNPA1L2Q32P51 320 aaKnown RBP17.33■□□□□ 0.36
PTPN6-210ENST00000538318 MS4A13Q5J8X5 152 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 USP30Q70CQ3 517 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 KDM1BQ8NB78 822 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 STK32AQ8WU08 396 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 MRGPRX3Q96LB0 322 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 NUCKS1Q9H1E3 243 aaKnown RBP17.33■□□□□ 0.36
PTPN6-210ENST00000538318 MTG2Q9H4K7 406 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 TM9SF3Q9HD45 589 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 ST7Q9NRC1 585 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 ANKRD6Q9Y2G4 727 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 PTPRBP23467 1997 aa17.33■□□□□ 0.36
PTPN6-210ENST00000538318 DSPP15924 2871 aaKnown RBP17.33■□□□□ 0.36
PTPN6-210ENST00000538318 ACADSBP45954 432 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 ST8SIA6P61647 398 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 SUZ12Q15022 739 aaKnown RBP17.32■□□□□ 0.36
PTPN6-210ENST00000538318 FSCBQ5H9T9 825 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 SYPL2Q5VXT5 272 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 CCNI2Q6ZMN8 369 aaPredicted RBP17.32■□□□□ 0.36
PTPN6-210ENST00000538318 CARNMT1Q8N4J0 409 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 ADAM32Q8TC27 787 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 RHBDD1Q8TEB9 315 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 FAM149B1Q96BN6 582 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 CDC6Q99741 560 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 ORAI3Q9BRQ5 295 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 TRIM62Q9BVG3 475 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 SLC4A5Q9BY07 1137 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 PABPC3Q9H361 631 aaKnown RBP17.32■□□□□ 0.36
PTPN6-210ENST00000538318 TOR4AQ9NXH8 423 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 SNX11Q9Y5W9 270 aa17.32■□□□□ 0.36
PTPN6-210ENST00000538318 SIN3BO75182 1162 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 DKK1O94907 266 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 FSBPO95073 299 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 AFPP02771 609 aaKnown RBP17.31■□□□□ 0.36
PTPN6-210ENST00000538318 CDH18Q13634 790 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 BECN1Q14457 450 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 DENND1BQ6P3S1 775 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 TMEM110Q86TL2 294 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 TAC4Q86UU9 113 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 PROSER1Q86XN7 944 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 CCDC117Q8IWD4 279 aaPredicted RBP17.31■□□□□ 0.36
PTPN6-210ENST00000538318 IGSF8Q969P0 613 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 CTNND2Q9UQB3 1225 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 NCKAP1Q9Y2A7 1128 aa17.31■□□□□ 0.36
PTPN6-210ENST00000538318 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPN6-210ENST00000538318 CACNA1GO43497 2377 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 TARSL2A2RTX5 802 aaKnown RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 CAPN9O14815 690 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 PAPSS1O43252 624 aaPredicted RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 RNASEH1O60930 286 aaKnown RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 LUC7L3O95232 432 aaKnown RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 IGHV4-34P06331 123 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 SRPRAP08240 638 aaKnown RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 SCAPQ12770 1279 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 SFSWAPQ12872 951 aaKnown RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 DCAF6Q58WW2 860 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 PITRM1Q5JRX3 1037 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 KCNT1Q5JUK3 1230 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 C9orf64Q5T6V5 341 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 KIAA0895LQ68EN5 471 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 MMS22LQ6ZRQ5 1243 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 DHX40Q8IX18 779 aaKnown RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 CFAP52Q8N1V2 620 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 ZNF606Q8WXB4 792 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 SRRTQ9BXP5 876 aaKnown RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 INTS2Q9H0H0 1204 aaKnown RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 POPDC2Q9HBU9 364 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 FBXL12Q9NXK8 326 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 SERGEFQ9UGK8 458 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 CYTH4Q9UIA0 394 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 XPO7Q9UIA9 1087 aaKnown RBP17.3■□□□□ 0.36
PTPN6-210ENST00000538318 ERVW-1Q9UQF0 538 aa17.3■□□□□ 0.36
PTPN6-210ENST00000538318 ITIH6Q6UXX5 1313 aa17.29■□□□□ 0.36
PTPN6-210ENST00000538318 A0A1W2PPC4 97 aa17.29■□□□□ 0.36
PTPN6-210ENST00000538318 MED7O43513 233 aa17.29■□□□□ 0.36
PTPN6-210ENST00000538318 PCDHGA12O60330 932 aa17.29■□□□□ 0.36
PTPN6-210ENST00000538318 MOCS3O95396 460 aa17.29■□□□□ 0.36
PTPN6-210ENST00000538318 TRUB2O95900 331 aaKnown RBP17.29■□□□□ 0.36
PTPN6-210ENST00000538318 MOCS2O96007 188 aaPredicted RBP17.29■□□□□ 0.36
PTPN6-210ENST00000538318 IGLV3-25P01717 112 aa17.29■□□□□ 0.36
PTPN6-210ENST00000538318 APOEP02649 317 aa17.29■□□□□ 0.36
PTPN6-210ENST00000538318 ATXN1LP0C7T5 689 aaKnown RBP17.29■□□□□ 0.36
PTPN6-210ENST00000538318 KRT5P13647 590 aa17.29■□□□□ 0.36
PTPN6-210ENST00000538318 TACR2P21452 398 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms