RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 NELL2Q99435 816 aa13.56□□□□□ -0.24
CHFR-210ENST00000535527 P2RY13Q9BPV8 354 aa13.56□□□□□ -0.24
CHFR-210ENST00000535527 NUP85Q9BW27 656 aa13.56□□□□□ -0.24
CHFR-210ENST00000535527 FAM126AQ9BYI3 521 aaPredicted RBP13.56□□□□□ -0.24
CHFR-210ENST00000535527 DCLK3Q9C098 648 aa13.56□□□□□ -0.24
CHFR-210ENST00000535527 C8orf33Q9H7E9 229 aaPredicted RBP13.56□□□□□ -0.24
CHFR-210ENST00000535527 SMG5Q9UPR3 1016 aaKnown RBP13.56□□□□□ -0.24
CHFR-210ENST00000535527 CHD8Q9HCK8 2581 aa13.56□□□□□ -0.24
CHFR-210ENST00000535527 DCDC2BA2VCK2 349 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 ANKRD62A6NC57 917 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 FAM170BA6NMN3 283 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 AKR1B10O60218 316 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 LRCH4O75427 683 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 CNTN5O94779 1100 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 ADH1CP00326 375 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 APOEP02649 317 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 TPM1P09493 284 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 HNRNPLP14866 589 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHFR-210ENST00000535527 TGM1P22735 817 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 HLA-FP30511 346 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 CCR1P32246 355 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 CSTF1Q05048 431 aaKnown RBP13.55□□□□□ -0.24
CHFR-210ENST00000535527 GAD2Q05329 585 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 AUHQ13825 339 aaKnown RBP13.55□□□□□ -0.24
CHFR-210ENST00000535527 EMC10Q5UCC4 262 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 CHSY1Q86X52 802 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 CD101Q93033 1021 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 CLDN23Q96B33 292 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 BTN2A3PQ96KV6 586 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 DESI2Q9BSY9 194 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 CNPY3Q9BT09 278 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 PARVAQ9NVD7 372 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHFR-210ENST00000535527 RRN3Q9NYV6 651 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 INTS6Q9UL03 887 aaKnown RBP13.55□□□□□ -0.24
CHFR-210ENST00000535527 VANGL2Q9ULK5 521 aa13.55□□□□□ -0.24
CHFR-210ENST00000535527 SHROOM3Q8TF72 1996 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 NCAM2O15394 837 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 TBL1XO60907 577 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 TMEM253P0C7T8 217 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 PSMA2P25787 234 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 CD70P32970 193 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 CCZ1BP86790 482 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 CCZ1P86791 482 aaPredicted RBP13.54□□□□□ -0.24
CHFR-210ENST00000535527 SEMA3BQ13214 749 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 C5orf22Q49AR2 442 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 BRMS1LQ5PSV4 323 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 CXorf57Q6NSI4 855 aaKnown RBP13.54□□□□□ -0.24
CHFR-210ENST00000535527 DCUN1D2Q6PH85 259 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 ZNF852Q6ZMS4 543 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 UNC45BQ8IWX7 931 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 TERB1Q8NA31 727 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 ZNF564Q8TBZ8 553 aaPredicted RBP13.54□□□□□ -0.24
CHFR-210ENST00000535527 FNIP1Q8TF40 1166 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 CCDC42Q96M95 316 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 ACOX2Q99424 681 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 SIK2Q9H0K1 926 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 GOLPH3Q9H4A6 298 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 DEF6Q9H4E7 631 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 NDFIP2Q9NV92 336 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 DNAJC17Q9NVM6 304 aaKnown RBP13.54□□□□□ -0.24
CHFR-210ENST00000535527 STIM2Q9P246 746 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 IMPACTQ9P2X3 320 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 ANAPC7Q9UJX3 599 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 GMEB2Q9UKD1 530 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 USP18Q9UMW8 372 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 ZNF510Q9Y2H8 683 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 USP24Q9UPU5 2620 aa13.54□□□□□ -0.24
CHFR-210ENST00000535527 PLXND1Q9Y4D7 1925 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 IGLV3-10A0A075B6K4 115 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 LRP3O75074 770 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 RNF40O75150 1001 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 KAT7O95251 611 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 NDUFA10O95299 355 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 H2AFZP0C0S5 128 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 MYBL1P10243 752 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 MIPP30301 263 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 ADRA1BP35368 520 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 KIR2DL1P43626 348 aaPredicted RBP13.53□□□□□ -0.24
CHFR-210ENST00000535527 RPS9P46781 194 aaKnown RBP13.53□□□□□ -0.24
CHFR-210ENST00000535527 SLC11A2P49281 568 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 TAS2R40P59535 323 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 SLC25A11Q02978 314 aaKnown RBP13.53□□□□□ -0.24
CHFR-210ENST00000535527 FUT11Q495W5 492 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 H2AFVQ71UI9 128 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 KIAA0907Q7Z7F0 614 aaPredicted RBP13.53□□□□□ -0.24
CHFR-210ENST00000535527 VPS36Q86VN1 386 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 ATP6V0D2Q8N8Y2 350 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 NETO1Q8TDF5 533 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 SORCS1Q8WY21 1168 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 NTAN1Q96AB6 310 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 SNRNP25Q9BV90 132 aaKnown RBP13.53□□□□□ -0.24
CHFR-210ENST00000535527 LACRTQ9GZZ8 138 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 CHRDQ9H2X0 955 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 WDCPQ9H6R7 721 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 LMAN1LQ9HAT1 526 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 ZNHIT6Q9NWK9 470 aaKnown RBP13.53□□□□□ -0.24
CHFR-210ENST00000535527 MPP6Q9NZW5 540 aa13.53□□□□□ -0.24
CHFR-210ENST00000535527 TRIM10Q9UDY6 481 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms