RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CYP2D6P10635 497 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 HARSP12081 509 aaKnown RBP4.02□□□□□ -1.77
USP48-215ENST00000534705 MATN1P21941 496 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 MMP8P22894 467 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 EEF1GP26641 437 aaKnown RBP4.02□□□□□ -1.77
USP48-215ENST00000534705 ZNF268Q14587 947 aaPredicted RBP4.02□□□□□ -1.77
USP48-215ENST00000534705 DAZAP2Q15038 168 aaPredicted RBP4.02□□□□□ -1.77
USP48-215ENST00000534705 MIDNQ504T8 468 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 CEP78Q5JTW2 689 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 GRHL2Q6ISB3 625 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 ANO7Q6IWH7 933 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 SLC18B1Q6NT16 456 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 BRINP3Q76B58 766 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 SKAP1Q86WV1 359 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 TICAM2Q86XR7 235 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 TXLNBQ8N3L3 684 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 FAM71DQ8N9W8 422 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 SMRP1Q8NCR6 262 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 GJA10Q969M2 543 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 CCDC138Q96M89 665 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 MYD88Q99836 296 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 PCDHAC1Q9H158 963 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 AS3MTQ9HBK9 375 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 VPS45Q9NRW7 570 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 BCCIPQ9P287 314 aaKnown RBP eCLIP4.02□□□□□ -1.77
USP48-215ENST00000534705 SCAF8Q9UPN6 1271 aaKnown RBP4.02□□□□□ -1.77
USP48-215ENST00000534705 MAN2B2Q9Y2E5 1009 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 RGPD2P0DJD1 1756 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 COL18A1P39060 1754 aa4.02□□□□□ -1.77
USP48-215ENST00000534705 PIK3C2AO00443 1686 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 ATP7BP35670 1465 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 VIRMAQ69YN4 1812 aaKnown RBP4.01□□□□□ -1.77
USP48-215ENST00000534705 SBF2Q86WG5 1849 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 KIF20BQ96Q89 1820 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.01□□□□□ -1.77
USP48-215ENST00000534705 CCDC194A0A1B0GVG4 234 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 SMIM35A0A1B0GVV1 85 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 GXYLT2A0PJZ3 443 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 DSCR3O14972 297 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 DHHO43323 396 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 PRAMEF2O60811 474 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 GLP2RO95838 553 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 MBPP02686 304 aaPredicted RBP4.01□□□□□ -1.77
USP48-215ENST00000534705 DUSP1P28562 367 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 MPGP29372 298 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 THBS4P35443 961 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 NR4A2P43354 598 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 HSPA7P48741 367 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 MFSD13AQ14CX5 517 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 MPEG1Q2M385 716 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 IL31Q6EBC2 164 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 RANBP10Q6VN20 620 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 DEF8Q6ZN54 512 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 P3H2Q8IVL5 708 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 GLIS1Q8NBF1 620 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 ZNF566Q969W8 418 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 P2RY11Q96G91 374 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 TNIP3Q96KP6 325 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 SGCZQ96LD1 299 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 SIN3AQ96ST3 1273 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 TMEM79Q9BSE2 394 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 EFHD1Q9BUP0 239 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 STK33Q9BYT3 514 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 CERS4Q9HA82 394 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 PDGFCQ9NRA1 345 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 ELOVL5Q9NYP7 299 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 ZNF112Q9UJU3 913 aa4.01□□□□□ -1.77
USP48-215ENST00000534705 ZMYND8Q9ULU4 1186 aaPredicted RBP4.01□□□□□ -1.77
USP48-215ENST00000534705 MAP2P11137 1827 aaKnown RBP4□□□□□ -1.77
USP48-215ENST00000534705 RALGAPBQ86X10 1494 aa4□□□□□ -1.77
USP48-215ENST00000534705 FAM234BA2RU67 622 aa4□□□□□ -1.77
USP48-215ENST00000534705 MYMKA6NI61 221 aa4□□□□□ -1.77
USP48-215ENST00000534705 CLIC1O00299 241 aa4□□□□□ -1.77
USP48-215ENST00000534705 PODXLO00592 558 aa4□□□□□ -1.77
USP48-215ENST00000534705 PLA2G6O60733 806 aa4□□□□□ -1.77
USP48-215ENST00000534705 NDST3O95803 873 aa4□□□□□ -1.77
USP48-215ENST00000534705 PECAM1P16284 738 aaPredicted RBP4□□□□□ -1.77
USP48-215ENST00000534705 ATP5F1P24539 256 aaPredicted RBP4□□□□□ -1.77
USP48-215ENST00000534705 GALNSP34059 522 aa4□□□□□ -1.77
USP48-215ENST00000534705 PBX1P40424 430 aa4□□□□□ -1.77
USP48-215ENST00000534705 MMP13P45452 471 aa4□□□□□ -1.77
USP48-215ENST00000534705 NEK3P51956 506 aa4□□□□□ -1.77
USP48-215ENST00000534705 JAK3P52333 1124 aa4□□□□□ -1.77
USP48-215ENST00000534705 WDR5P61964 334 aaKnown RBP4□□□□□ -1.77
USP48-215ENST00000534705 HSF1Q00613 529 aa4□□□□□ -1.77
USP48-215ENST00000534705 ZNF260Q3ZCT1 412 aa4□□□□□ -1.77
USP48-215ENST00000534705 SUPT20HL1Q3ZLR7 823 aa4□□□□□ -1.77
USP48-215ENST00000534705 TMTC4Q5T4D3 741 aa4□□□□□ -1.77
USP48-215ENST00000534705 RAP1GAP2Q684P5 730 aa4□□□□□ -1.77
USP48-215ENST00000534705 MIS18BP1Q6P0N0 1132 aa4□□□□□ -1.77
USP48-215ENST00000534705 FBXO38Q6PIJ6 1188 aa4□□□□□ -1.77
USP48-215ENST00000534705 UBE2Q1Q7Z7E8 422 aa4□□□□□ -1.77
USP48-215ENST00000534705 OR52L2PQ8NGH6 319 aa4□□□□□ -1.77
USP48-215ENST00000534705 OSR1Q8TAX0 266 aaPredicted RBP4□□□□□ -1.77
USP48-215ENST00000534705 ADAMTS15Q8TE58 950 aa4□□□□□ -1.77
USP48-215ENST00000534705 QTRT1Q9BXR0 403 aaKnown RBP4□□□□□ -1.77
USP48-215ENST00000534705 DDX24Q9GZR7 859 aaKnown RBP eCLIP4□□□□□ -1.775e-11■□□□□ 10.5
USP48-215ENST00000534705 SAP30LQ9HAJ7 183 aa4□□□□□ -1.77
USP48-215ENST00000534705 USP29Q9HBJ7 922 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms