RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 ASPMQ8IZT6 3477 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 ADAMTS9Q9P2N4 1935 aa12.86□□□□□ -0.35
CAPRIN1-213ENST00000533562 CABIN1Q9Y6J0 2220 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 BECN2A8MW95 431 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 LUC7L3O95232 432 aaKnown RBP12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 ABCB4P21439 1286 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 KRT9P35527 623 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 CSKP41240 450 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 RPS14P62263 151 aaKnown RBP12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 SIM1P81133 766 aaPredicted RBP12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 MTA1Q13330 715 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 TTC31Q49AM3 519 aaPredicted RBP12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 DCAF6Q58WW2 860 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 IRF2BP1Q8IU81 584 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 LGI2Q8N0V4 545 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 CFAP52Q8N1V2 620 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 ZCCHC9Q8N567 271 aaKnown RBP12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 SHC3Q92529 594 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 RNF34Q969K3 372 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 PPP1R13BQ96KQ4 1090 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 LMLNQ96KR4 655 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 PRICKLE1Q96MT3 831 aaPredicted RBP12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 EIF2B4Q9UI10 523 aaKnown RBP12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 PCDHGC3Q9UN70 934 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 NCKAP1Q9Y2A7 1128 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 CEP83Q9Y592 693 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 PCDHB9Q9Y5E1 797 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 CFAP47Q6ZTR5 3102 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 IGF2RP11717 2491 aa12.85□□□□□ -0.35
CAPRIN1-213ENST00000533562 AKAP13Q12802 2813 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 KCNU1A8MYU2 1149 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 F5H5T6 163 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 HSF2BPO75031 334 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 TRIM16O95361 564 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 SRPRAP08240 638 aaKnown RBP12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 CD59P13987 128 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 TACR2P21452 398 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 CCR1P32246 355 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 ACSL1P33121 698 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 NNMTP40261 264 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 AFF3P51826 1226 aaKnown RBP12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 BPIFB4P59827 614 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 GRIK2Q13002 908 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 SLC12A1Q13621 1099 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 ARID5BQ14865 1188 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 NUMA1Q14980 2115 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 MAN2A1Q16706 1144 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 HNRNPA1L2Q32P51 320 aaKnown RBP12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 FSCBQ5H9T9 825 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 RNF219Q5W0B1 726 aaPredicted RBP12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 RAP1GAP2Q684P5 730 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 ZNF776Q68DI1 518 aaPredicted RBP12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 CHSY1Q86X52 802 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 WDTC1Q8N5D0 677 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 OR2I1PQ8NGU4 316 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 GANCQ8TET4 914 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 PPP1R9BQ96SB3 815 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 RSPH9Q9H1X1 276 aaPredicted RBP12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 SGK2Q9HBY8 427 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 ASNSD1Q9NWL6 643 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 DACH1Q9UI36 760 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 WASF3Q9UPY6 502 aa12.84□□□□□ -0.35
CAPRIN1-213ENST00000533562 ZZEF1O43149 2961 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 FOXN3O00409 490 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 GJB3O75712 270 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 SEMA4FO95754 770 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 CER1O95813 267 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 IGLV3-25P01717 112 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 OXCT1P55809 520 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 ECT2LQ008S8 904 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 APBA1Q02410 837 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 EIF4EBP2Q13542 120 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 TAF5Q15542 800 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 TEAD4Q15561 434 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 TRIP6Q15654 476 aaKnown RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 PITRM1Q5JRX3 1037 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 RABGAP1LQ5R372 815 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 TTC39BQ5VTQ0 682 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 C11orf57Q6ZUT1 292 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 USP30Q70CQ3 517 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 DEFB106AQ8N104 65 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 C1orf216Q8TAB5 229 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 SNX19Q92543 992 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 MYEOVQ96EZ4 313 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 MYO19Q96H55 970 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 SLC2A13Q96QE2 648 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 CPXM1Q96SM3 734 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 SCNM1Q9BWG6 230 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 NDST4Q9H3R1 872 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 CLSTN2Q9H4D0 955 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 C6orf106Q9H6K1 298 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 GAREM1Q9H706 876 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 SYNCQ9H7C4 482 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 OSGEPQ9NPF4 335 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms