RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PLXNB3Q9ULL4 1909 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 FREM2Q5SZK8 3169 aa13.54□□□□□ -0.24
COPB1-209ENST00000533096 CEP192Q8TEP8 1941 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 PLXND1Q9Y4D7 1925 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 TK2O00142 265 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 MAPK13O15264 365 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 ACSL4O60488 711 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 SDC3O75056 442 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 IL1BP01584 269 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 CDK4P11802 303 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 GLDCP23378 1020 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 MAT2AP31153 395 aaKnown RBP13.53□□□□□ -0.24
COPB1-209ENST00000533096 ACADVLP49748 655 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 TBX4P57082 545 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 ZNF445P59923 1031 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 RPS24P62847 133 aaKnown RBP13.53□□□□□ -0.24
COPB1-209ENST00000533096 HNRNPA1L2Q32P51 320 aaKnown RBP13.53□□□□□ -0.24
COPB1-209ENST00000533096 SLC45A4Q5BKX6 768 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 C9orf64Q5T6V5 341 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 BHLHA9Q7RTU4 235 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 UNC45BQ8IWX7 931 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 STK40Q8N2I9 435 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 ZNF843Q8N446 348 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 TTC39CQ8N584 583 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.53□□□□□ -0.24
COPB1-209ENST00000533096 FBXL13Q8NEE6 735 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 FIBINQ8TAL6 211 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 TTC17Q96AE7 1141 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 RPL10LQ96L21 214 aaKnown RBP13.53□□□□□ -0.24
COPB1-209ENST00000533096 MIS12Q9H081 205 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 STOML2Q9UJZ1 356 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 SCML1Q9UN30 329 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 ERVW-1Q9UQF0 538 aa13.53□□□□□ -0.24
COPB1-209ENST00000533096 URB1O60287 2271 aaKnown RBP13.53□□□□□ -0.24
COPB1-209ENST00000533096 A0A1W2PR77 199 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 K7ELQ4 463 aaPredicted RBP13.52□□□□□ -0.25
COPB1-209ENST00000533096 BRINP1O60477 761 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 ZSCAN22P10073 491 aaPredicted RBP13.52□□□□□ -0.25
COPB1-209ENST00000533096 PLA2G2AP14555 144 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 GOT1P17174 413 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 NUCB2P80303 420 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 DNM1Q05193 864 aaKnown RBP13.52□□□□□ -0.25
COPB1-209ENST00000533096 BST2Q10589 180 aaKnown RBP13.52□□□□□ -0.25
COPB1-209ENST00000533096 TAF1BQ53T94 588 aaPredicted RBP13.52□□□□□ -0.25
COPB1-209ENST00000533096 FSCBQ5H9T9 825 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 TCERG1LQ5VWI1 586 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 RNF219Q5W0B1 726 aaPredicted RBP13.52□□□□□ -0.25
COPB1-209ENST00000533096 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 KDM7AQ6ZMT4 941 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 SND1Q7KZF4 910 aaKnown RBP eCLIP13.52□□□□□ -0.253e-6■■■□□ 16.8
COPB1-209ENST00000533096 MYEOVQ96EZ4 313 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 MRGPRX3Q96LB0 322 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 FAM129BQ96TA1 746 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 NRSN2Q9GZP1 204 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 OSBPL2Q9H1P3 480 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 INTS6Q9UL03 887 aaKnown RBP13.52□□□□□ -0.25
COPB1-209ENST00000533096 CFAP45Q9UL16 551 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 CLCA2Q9UQC9 943 aa13.52□□□□□ -0.25
COPB1-209ENST00000533096 TYW5A2RUC4 315 aaKnown RBP13.51□□□□□ -0.25
COPB1-209ENST00000533096 PAPSS1O43252 624 aaPredicted RBP13.51□□□□□ -0.25
COPB1-209ENST00000533096 MOCS2O96007 188 aaPredicted RBP13.51□□□□□ -0.25
COPB1-209ENST00000533096 HSP90AA1P07900 732 aaKnown RBP13.51□□□□□ -0.25
COPB1-209ENST00000533096 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 PFKFB1P16118 471 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 CKMT2P17540 419 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 EPHA8P29322 1005 aaPredicted RBP13.51□□□□□ -0.25
COPB1-209ENST00000533096 GTF2H1P32780 548 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 ACTN2P35609 894 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 MXI1P50539 228 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 NXPH1P58417 271 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 CFHR1Q03591 330 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 CDH18Q13634 790 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 STAT4Q14765 748 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 RTP5Q14D33 572 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 POM121L1PQ3SYA9 428 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 FAM133BQ5BKY9 247 aaKnown RBP13.51□□□□□ -0.25
COPB1-209ENST00000533096 MPP7Q5T2T1 576 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 NADSYN1Q6IA69 706 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 PRPF39Q86UA1 669 aaKnown RBP13.51□□□□□ -0.25
COPB1-209ENST00000533096 AADATQ8N5Z0 425 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 HJURPQ8NCD3 748 aaPredicted RBP13.51□□□□□ -0.25
COPB1-209ENST00000533096 TSC1Q92574 1164 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 MYO19Q96H55 970 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 RCOR1Q9UKL0 485 aa13.51□□□□□ -0.25
COPB1-209ENST00000533096 TARSL2A2RTX5 802 aaKnown RBP13.5□□□□□ -0.25
COPB1-209ENST00000533096 STX10O60499 249 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 RTN2O75298 545 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 MOCS3O95396 460 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 LATS1O95835 1130 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 F13A1P00488 732 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 CALCAP01258 141 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 ASLP04424 464 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 VDRP11473 427 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 CCR5P51681 352 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 DAOAP59103 153 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 ECT2LQ008S8 904 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 KCNH2Q12809 1159 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 ACCSLQ4AC99 568 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 DCAF17Q5H9S7 520 aaPredicted RBP13.5□□□□□ -0.25
COPB1-209ENST00000533096 PITRM1Q5JRX3 1037 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms