RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 PABPC1P11940 636 aaKnown RBP20.51■□□□□ 0.87
CPSF1-209ENST00000532725 ADRA1BP35368 520 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 EIF4A3P38919 411 aaKnown RBP20.51■□□□□ 0.87
CPSF1-209ENST00000532725 PLA2G5P39877 138 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 DGKEP52429 567 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 OGDHQ02218 1023 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 LMAN2Q12907 356 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 EIF4HQ15056 248 aaKnown RBP20.51■□□□□ 0.87
CPSF1-209ENST00000532725 RABGAP1LQ5R372 815 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 ACBD5Q5T8D3 534 aaPredicted RBP20.51■□□□□ 0.87
CPSF1-209ENST00000532725 DCUN1D2Q6PH85 259 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 CHST9Q7L1S5 443 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 LONP2Q86WA8 852 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 WFIKKN2Q8TEU8 576 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 FAM172AQ8WUF8 416 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 UCMAQ8WVF2 138 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 FAM122AQ96E09 287 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 RPRD1AQ96P16 312 aaPredicted RBP20.51■□□□□ 0.87
CPSF1-209ENST00000532725 HHIPQ96QV1 700 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 GABRG3Q99928 467 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 CNOT8Q9UFF9 292 aaKnown RBP20.51■□□□□ 0.87
CPSF1-209ENST00000532725 EBF1Q9UH73 591 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 NENFQ9UMX5 172 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 VPS13AQ96RL7 3174 aa20.51■□□□□ 0.87
CPSF1-209ENST00000532725 ANKRD62A6NC57 917 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 TMEM191CA6NGB0 347 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 WASH3PC4AMC7 463 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 NPC1O15118 1278 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 ATMINO43313 823 aaPredicted RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 MFAP3LO75121 409 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 APBB3O95704 486 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 TPM1P09493 284 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 MYBL1P10243 752 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 GGCXP38435 758 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 WASP42768 502 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 PXNP49023 591 aaPredicted RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 IRAK1P51617 712 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 ENPP2Q13822 863 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 ASTE1Q2TB18 679 aaPredicted RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 TTC39BQ5VTQ0 682 aaPredicted RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 HEATR6Q6AI08 1181 aaKnown RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 ALKBH5Q6P6C2 394 aaKnown RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 ZC3H14Q6PJT7 736 aaKnown RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 TMC6Q7Z403 805 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 WDR5BQ86VZ2 330 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 CHPFQ8IZ52 775 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 AHI1Q8N157 1196 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 CCAR2Q8N163 923 aaKnown RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 SORCS1Q8WY21 1168 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 TTC17Q96AE7 1141 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 CNPY3Q9BT09 278 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 CD248Q9HCU0 757 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 ABHD10Q9NUJ1 306 aa20.5■□□□□ 0.87
CPSF1-209ENST00000532725 KIAA1522Q9P206 1035 aaPredicted RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 INTS6Q9UL03 887 aaKnown RBP20.5■□□□□ 0.87
CPSF1-209ENST00000532725 A0A1W2PQF6 199 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 H0Y626 953 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 CCP110O43303 1012 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 HRO43593 1189 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 ZNF75DP51815 510 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 MAPK8IP2Q13387 824 aaPredicted RBP20.49■□□□□ 0.87
CPSF1-209ENST00000532725 CDH18Q13634 790 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 MBLAC2Q68D91 279 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 SDE2Q6IQ49 451 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 CIR1Q86X95 450 aaPredicted RBP20.49■□□□□ 0.87
CPSF1-209ENST00000532725 CCDC117Q8IWD4 279 aaPredicted RBP20.49■□□□□ 0.87
CPSF1-209ENST00000532725 TSTD1Q8NFU3 115 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 ZNF653Q96CK0 615 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 TRIM11Q96F44 468 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 MAGEB5Q9BZ81 275 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 CIPCQ9C0C6 399 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 SEMA4AQ9H3S1 761 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 CACNA2D2Q9NY47 1150 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 STON1Q9Y6Q2 735 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 ZFHX2Q9C0A1 2572 aaPredicted RBP20.49■□□□□ 0.87
CPSF1-209ENST00000532725 FANCMQ8IYD8 2048 aa20.49■□□□□ 0.87
CPSF1-209ENST00000532725 IGLV3-10A0A075B6K4 115 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 A0A1B0GVM2 712 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 SSU72P8A0A1W2PR75 194 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 TCAF2A6NFQ2 919 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 AKR1B15C9JRZ8 316 aaPredicted RBP20.48■□□□□ 0.87
CPSF1-209ENST00000532725 CNTN5O94779 1100 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 ZNF234Q14588 700 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 E2F5Q15329 346 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 PTPRNQ16849 979 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 TSR1Q2NL82 804 aaKnown RBP20.48■□□□□ 0.87
CPSF1-209ENST00000532725 ARL13BQ3SXY8 428 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 CCDC122Q5T0U0 273 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 RASSF3Q86WH2 238 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 CCDC185Q8N715 623 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 MRFAP1L1Q96HT8 127 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 CHP1Q99653 195 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 ANP32EQ9BTT0 268 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 OSBPL2Q9H1P3 480 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 ZNHIT6Q9NWK9 470 aaKnown RBP20.48■□□□□ 0.87
CPSF1-209ENST00000532725 MYO15AQ9UKN7 3530 aa20.48■□□□□ 0.87
CPSF1-209ENST00000532725 DMDP11532 3685 aa20.47■□□□□ 0.87
CPSF1-209ENST00000532725 E9PAM4 449 aa20.47■□□□□ 0.87
CPSF1-209ENST00000532725 AXIN1O15169 862 aa20.47■□□□□ 0.87
CPSF1-209ENST00000532725 SRGAP2O75044 1071 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms