RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 CSGALNACT1Q8TDX6 532 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 VAT1Q99536 393 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 PORCNQ9H237 461 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TCF7L2Q9NQB0 619 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 DDX4Q9NQI0 724 aaKnown RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 CATSPERZQ9NTU4 200 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ZSCAN32Q9NX65 697 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 STMN3Q9NZ72 180 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 SLIT3O75094 1523 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 SAC3D1A6NKF1 404 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 E7ENQ6 273 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 WNT10BO00744 389 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TPST1O60507 370 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 CSDE1O75534 798 aaKnown RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ATP6V1G2O95670 118 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 HMGCRP04035 888 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 USP17L7P0C7H9 530 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ATP6V1B1P15313 513 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 YBX3P16989 372 aaKnown RBP eCLIP8.65□□□□□ -1.029e-12■□□□□ 9.1
CTNND1-227ENST00000530748 TBX2Q13207 712 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 CRYMQ14894 314 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 EARS2Q5JPH6 523 aaKnown RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TMC7Q7Z402 723 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TMC3Q7Z5M5 1100 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 DSG4Q86SJ6 1040 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 FAM228AQ86W67 206 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 CDK20Q8IZL9 346 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ZCCHC9Q8N567 271 aaKnown RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ZNF614Q8N883 585 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ACTL9Q8TC94 416 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TKTL2Q9H0I9 626 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 WDR41Q9HAD4 459 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 MID1IP1Q9NPA3 183 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ETNK2Q9NVF9 386 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 TAS2R13Q9NYV9 303 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 NDUFA13Q9P0J0 144 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 CHADO15335 359 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 ADCY6O43306 1168 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 CABYRO75952 493 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 CYP1A2P05177 515 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 POLR2EP19388 210 aaKnown RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 MMP13P45452 471 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 NUMBP49757 651 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 CDK7P50613 346 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 HIRAP54198 1017 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-227ENST00000530748 RIPOR1Q6ZS17 1223 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 FBXO25Q8TCJ0 367 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 MTMR9Q96QG7 549 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 PANX3Q96QZ0 392 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 BTBD10Q9BSF8 475 aa8.65□□□□□ -1.02
CTNND1-227ENST00000530748 NDUFB5O43674 189 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 NFICP08651 508 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 MAGEA10P43363 369 aaPredicted RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 PIK3CGP48736 1102 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 TUFMP49411 452 aaKnown RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 PURAQ00577 322 aaKnown RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 FASTKQ14296 549 aaKnown RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 RRP1BQ14684 758 aaKnown RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 SLC9A5Q14940 896 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 GSTA3Q16772 222 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 PARP6Q2NL67 630 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 ZCWPW2Q504Y3 356 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 USP39Q53GS9 565 aaKnown RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 DACT2Q5SW24 774 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 CATSPERGQ6ZRH7 1159 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 USP45Q70EL2 814 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 EID3Q8N140 333 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 ZNF557Q8N988 423 aaPredicted RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 PPP1R16AQ96I34 528 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 A1CFQ9NQ94 594 aaKnown RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 PAPOLBQ9NRJ5 636 aaKnown RBP8.65□□□□□ -1.03
CTNND1-227ENST00000530748 CROTQ9UKG9 612 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 RAB23Q9ULC3 237 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 AK9Q5TCS8 1911 aa8.65□□□□□ -1.03
CTNND1-227ENST00000530748 MEI4A8MW99 385 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 LTFP02788 710 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 GTF2E2P29084 291 aaKnown RBP8.64□□□□□ -1.03
CTNND1-227ENST00000530748 WEE1P30291 646 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 FMO4P31512 558 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 ADCYAP1R1P41586 468 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 MAPK9P45984 424 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 ALDH9A1P49189 494 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 DPYSL3Q14195 570 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 BTG3Q14201 252 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-227ENST00000530748 DDR2Q16832 855 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 ALFQ53S48 1182 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 FAM45BPQ6NSW5 357 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 MILR1Q7Z6M3 343 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 CCDC103Q8IW40 242 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 SCUBE3Q8IX30 993 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 TRAPPC12Q8WVT3 735 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 C18orf25Q96B23 403 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-227ENST00000530748 UNKQ9C0B0 810 aaKnown RBP8.64□□□□□ -1.03
CTNND1-227ENST00000530748 MRPL17Q9NRX2 175 aaKnown RBP8.64□□□□□ -1.03
CTNND1-227ENST00000530748 SYBUQ9NX95 663 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 KLHL28Q9NXS3 571 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 GTF2A1LQ9UNN4 478 aa8.64□□□□□ -1.03
CTNND1-227ENST00000530748 NDUFAF1Q9Y375 327 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms