RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 GP5P40197 560 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 BNIP1Q12981 228 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 GLB1LQ6UWU2 654 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 PIGWQ7Z7B1 504 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 SPATA22Q8NHS9 363 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 PCYT2Q99447 389 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 PPCSQ9HAB8 311 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 GBA2Q9HCG7 927 aaPredicted RBP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 SUN2Q9UH99 717 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 TRDMT1O14717 391 aaKnown RBP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 SMNDC1O75940 238 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 KLHL2O95198 593 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 TUBP50607 506 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 GPX6P59796 221 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 MRPS22P82650 360 aaKnown RBP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 OTOP3Q7RTS5 596 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 NKD2Q969F2 451 aaPredicted RBP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 EBNA1BP2Q99848 306 aaKnown RBP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 EBF4Q9BQW3 602 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 TCF7L2Q9NQB0 619 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 CHRAC1Q9NRG0 131 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 CDYLQ9Y232 598 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 ACOT9Q9Y305 439 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 ATP8B3O60423 1300 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 SMIM28A0A1B0GU29 152 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 SUPT3HB4E1H0 165 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 MDM4O15151 490 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 PFDN1O60925 122 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 SUPT3HO75486 399 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 MTA2O94776 668 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 ASMTLO95671 621 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 LTFP02788 710 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 STMN1P16949 149 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 CHRM3P20309 590 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 GPD2P43304 727 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 KHDC1Q4VXA5 237 aaKnown RBP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 SPDYCQ5MJ68 293 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 SEL1L3Q68CR1 1132 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 ZBTB46Q86UZ6 589 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 KLHL5Q96PQ7 755 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 GCNAQ96QF7 691 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 CAMKK2Q96RR4 588 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 EFHD1Q9BUP0 239 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 NIFKQ9BYG3 293 aaKnown RBP12.65□□□□□ -0.38
SCN3B-206ENST00000530277 SEMA6AQ9H2E6 1030 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 GPAMQ9HCL2 828 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 CYTH4Q9UIA0 394 aa12.65□□□□□ -0.38
SCN3B-206ENST00000530277 A0A0A0MRY4 1105 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 RASSF9O75901 435 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 HADHBP55084 474 aaKnown RBP12.64□□□□□ -0.39
SCN3B-206ENST00000530277 ZNF460Q14592 562 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 RBBP7Q16576 425 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 AGKQ53H12 422 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 OVOS1Q6IE37 1185 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 SCIMPQ6UWF3 145 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 LRRC74BQ6ZQY2 392 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 TSHZ1Q6ZSZ6 1077 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 SLC41A1Q8IVJ1 513 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 C12orf50Q8NA57 414 aaPredicted RBP12.64□□□□□ -0.39
SCN3B-206ENST00000530277 KCTD4Q8WVF5 259 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 SPATA13Q96N96 652 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 CDRT15Q96T59 188 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 APOL5Q9BWW9 433 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 MRPL1Q9BYD6 325 aaKnown RBP12.64□□□□□ -0.39
SCN3B-206ENST00000530277 CCDC90BQ9GZT6 254 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 SIX4Q9UIU6 781 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 SNX13Q9Y5W8 968 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 PNPLA4P41247 253 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
SCN3B-206ENST00000530277 PITX1P78337 314 aaPredicted RBP12.64□□□□□ -0.39
SCN3B-206ENST00000530277 TTC30AQ86WT1 665 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 RNF217Q8TC41 542 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 PIWIL2Q8TC59 973 aaKnown RBP12.64□□□□□ -0.39
SCN3B-206ENST00000530277 NMD3Q96D46 503 aaKnown RBP12.64□□□□□ -0.39
SCN3B-206ENST00000530277 CAAP1Q9H8G2 361 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 THAP1Q9NVV9 213 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 MYH7BA7E2Y1 1941 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 NT5C1B-RDH14C9J2C7 533 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 GSTA4O15217 222 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 TSPAN1O60635 241 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 ITGA2BP08514 1039 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 SCNN1BP51168 640 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 CCNHP51946 323 aaPredicted RBP12.64□□□□□ -0.39
SCN3B-206ENST00000530277 SOWAHAQ2M3V2 549 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 PLPPR4Q7Z2D5 763 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 WNT8BQ93098 351 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 TUBGCP3Q96CW5 907 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 PEBP4Q96S96 227 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 LATS2Q9NRM7 1088 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 DCDC2Q9UHG0 476 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 WASF2Q9Y6W5 498 aa12.64□□□□□ -0.39
SCN3B-206ENST00000530277 SLC12A8A0AV02 714 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 MT-CYBP00156 380 aaPredicted RBP12.63□□□□□ -0.39
SCN3B-206ENST00000530277 SETSIPP0DME0 302 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms