RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ACP1P24666 158 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 CSKP41240 450 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 RXRGP48443 463 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 GCLMP48507 274 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 NASPP49321 788 aaPredicted RBP19.72■□□□□ 0.75
SSRP1-204ENST00000529002 CCR5P51681 352 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 METAP1P53582 386 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 PCBP4P57723 403 aaKnown RBP19.72■□□□□ 0.75
SSRP1-204ENST00000529002 TMPRSS3P57727 454 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 KCNC4Q03721 635 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 STK4Q13043 487 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 ILKQ13418 452 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 HNRNPA1L2Q32P51 320 aaKnown RBP19.72■□□□□ 0.75
SSRP1-204ENST00000529002 C9orf64Q5T6V5 341 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 CEP135Q66GS9 1140 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 MMS22LQ6ZRQ5 1243 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 IQUBQ8NA54 791 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 LINC00301Q8NCQ3 95 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 KIAA0895Q8NCT3 520 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 OR14C36Q8NHC7 312 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 HIC2Q96JB3 615 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 NIF3L1Q9GZT8 377 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 ADAMTS1Q9UHI8 967 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 STOML2Q9UJZ1 356 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 CA5BQ9Y2D0 317 aa19.72■□□□□ 0.75
SSRP1-204ENST00000529002 ZBED1O96006 694 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 NR3C1P04150 777 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 NEFLP07196 543 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 MAT2AP31153 395 aaKnown RBP19.71■□□□□ 0.75
SSRP1-204ENST00000529002 ADPRHP54922 357 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 PPP3CAQ08209 521 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 PKDCCQ504Y2 493 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 PIK3R6Q5UE93 754 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 PM20D1Q6GTS8 502 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 CACTIN-AS1Q8N1I8 211 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 SLC4A11Q8NBS3 891 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 FAM129BQ96TA1 746 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 KCTD10Q9H3F6 313 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 SCML1Q9UN30 329 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 HBS1LQ9Y450 684 aaKnown RBP19.71■□□□□ 0.75
SSRP1-204ENST00000529002 PTPN13Q12923 2485 aa19.71■□□□□ 0.75
SSRP1-204ENST00000529002 YJEFN3A6XGL0 299 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 E7ENQ6 273 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 SPTLC2O15270 562 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 POLR2DO15514 142 aaKnown RBP19.7■□□□□ 0.74
SSRP1-204ENST00000529002 KLK10O43240 276 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 SLC28A2O43868 658 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 RNASEH1O60930 286 aaKnown RBP19.7■□□□□ 0.74
SSRP1-204ENST00000529002 C6P13671 934 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 RAD23BP54727 409 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 ST8SIA6P61647 398 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 GABREP78334 506 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 FAM133BQ5BKY9 247 aaKnown RBP19.7■□□□□ 0.74
SSRP1-204ENST00000529002 BROXQ5VW32 411 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 KIAA1614Q5VZ46 1190 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 BSPRYQ5W0U4 402 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 SLC9A9Q8IVB4 645 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 MFN1Q8IWA4 741 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 STK40Q8N2I9 435 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 SLC25A45Q8N413 288 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 TATDN2Q93075 761 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 TTC17Q96AE7 1141 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 WBP1Q96G27 269 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 ERVMER34-1Q9H9K5 563 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 SLCO3A1Q9UIG8 710 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 FZD4Q9ULV1 537 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 MTMR6Q9Y217 621 aa19.7■□□□□ 0.74
SSRP1-204ENST00000529002 DOPEY2Q9Y3R5 2298 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3DA0A087WVF3 549 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3IA0A087WXS9 549 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3EA0A087X179 549 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3KA0A087X1G2 549 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3FA6NER0 549 aaPredicted RBP19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3LB9A6J9 549 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 IKBKBO14920 756 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 KLRC4O43908 158 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3HP0C7X1 549 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 VAMP7P51809 220 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 RPS24P62847 133 aaKnown RBP19.69■□□□□ 0.74
SSRP1-204ENST00000529002 ADIGQ0VDE8 80 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 CUL4AQ13619 759 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 POM121L1PQ3SYA9 428 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 FSCBQ5H9T9 825 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3GQ6DHY5 549 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 NADSYN1Q6IA69 706 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3CQ6IPX1 549 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 NAPEPLDQ6IQ20 393 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 SND1Q7KZF4 910 aaKnown RBP eCLIP19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TMC6Q7Z403 805 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 TBC1D3Q8IZP1 549 aaPredicted RBP19.69■□□□□ 0.74
SSRP1-204ENST00000529002 GOLGA5Q8TBA6 731 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 RNF139Q8WU17 664 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 KCNE4Q8WWG9 221 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 ZNF578Q96N58 590 aaPredicted RBP19.69■□□□□ 0.74
SSRP1-204ENST00000529002 IMPG2Q9BZV3 1241 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 UCKL1Q9NWZ5 548 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 ARHGAP20Q9P2F6 1191 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 ERVW-1Q9UQF0 538 aa19.69■□□□□ 0.74
SSRP1-204ENST00000529002 COL27A1Q8IZC6 1860 aaPredicted RBP19.69■□□□□ 0.74
SSRP1-204ENST00000529002 PVALEFA0A1B0GWK0 134 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms