RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NDST2P52849 883 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 GNG11P61952 73 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 OGDHQ02218 1023 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 LMNB2Q03252 620 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 TFF2Q03403 129 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 SLC20A2Q08357 652 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 ZNF252P-AS1Q0IIN9 211 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 GRSF1Q12849 480 aaKnown RBP eCLIP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 LRRC32Q14392 662 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 DHCR24Q15392 516 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 EML3Q32P44 896 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 HSF5Q4G112 596 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 MEI1Q5TIA1 1274 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 CCDC181Q5TID7 509 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 RAP1GAP2Q684P5 730 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 TIGD7Q6NT04 549 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 RETSATQ6NUM9 610 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 ZNF852Q6ZMS4 543 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 RFX8Q6ZV50 586 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 MFN1Q8IWA4 741 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 AHI1Q8N157 1196 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 SYNPOQ8N3V7 929 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 FIBINQ8TAL6 211 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 FAM71BQ8TC56 605 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 CASKIN2Q8WXE0 1202 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 FGF14Q92915 247 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 ACDQ96AP0 544 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 LRRC45Q96CN5 670 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 HES6Q96HZ4 224 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 CCDC114Q96M63 670 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 PPP1R2P1Q96PQ5 205 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 NAPGQ99747 312 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 C2orf49Q9BVC5 232 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 MAGEH1Q9H213 219 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 TMEM248Q9NWD8 314 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 TRMT1Q9NXH9 659 aaKnown RBP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 FEZ2Q9UHY8 353 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-211ENST00000528787 FBXL21Q9UKT6 434 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 VANGL2Q9ULK5 521 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 CCL26Q9Y258 94 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 HS3ST4Q9Y661 456 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 DUSP10Q9Y6W6 482 aa8.17□□□□□ -1.1
SSBP3-211ENST00000528787 RCCD1A6NED2 376 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 NEDD8-MDP1E9PL57 170 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 APOL1O14791 398 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 RAMP2O60895 175 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 TBL1XO60907 577 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 ATG13O75143 517 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 STK10O94804 968 aaKnown RBP8.16□□□□□ -1.1
SSBP3-211ENST00000528787 LRIG2O94898 1065 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 GJB6O95452 261 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 KLKB1P03952 638 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 KDELR1P24390 212 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 CASQ1P31415 396 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 GJC1P36383 396 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 PAFAH1B1P43034 410 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 DGKGP49619 791 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 PGFP49763 221 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 ST8SIA6P61647 398 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 ETF1P62495 437 aaKnown RBP8.16□□□□□ -1.1
SSBP3-211ENST00000528787 FAM133BQ5BKY9 247 aaKnown RBP8.16□□□□□ -1.1
SSBP3-211ENST00000528787 DGKKQ5KSL6 1271 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 OTUD1Q5VV17 481 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-211ENST00000528787 RNF219Q5W0B1 726 aaPredicted RBP8.16□□□□□ -1.1
SSBP3-211ENST00000528787 GRAMD4Q6IC98 578 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 SDE2Q6IQ49 451 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 TRNP1Q6NT89 227 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 FBXL22Q6P050 247 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 ANKS1BQ7Z6G8 1248 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 REXO1L1PQ8IX06 675 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 CCDC185Q8N715 623 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 RTL3Q8N8U3 475 aaKnown RBP8.16□□□□□ -1.1
SSBP3-211ENST00000528787 KDM1BQ8NB78 822 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 KIF18AQ8NI77 898 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 P3H4Q92791 437 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 BTBD6Q96KE9 485 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 RUNDC3BQ96NL0 473 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 PNKPQ96T60 521 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 PRMT1Q99873 361 aaKnown RBP8.16□□□□□ -1.1
SSBP3-211ENST00000528787 OSBPL6Q9BZF3 934 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 SMG9Q9H0W8 520 aaKnown RBP8.16□□□□□ -1.1
SSBP3-211ENST00000528787 EBF3Q9H4W6 596 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 PLA2G4CQ9UP65 541 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 TBC1D30Q9Y2I9 924 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 SLC27A6Q9Y2P4 619 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 HYOU1Q9Y4L1 999 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 WNT6Q9Y6F9 365 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 CAPN6Q9Y6Q1 641 aa8.16□□□□□ -1.1
SSBP3-211ENST00000528787 KCNK3O14649 394 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 NDC80O14777 642 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 GREM1O60565 184 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 NEBLO76041 1014 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 CYP17A1P05093 508 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 RHOCP08134 193 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 TNNT1P13805 278 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 POLR2EP19388 210 aaKnown RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 TFE3P19532 575 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 CES1P23141 567 aa8.15□□□□□ -1.1
SSBP3-211ENST00000528787 SP100P23497 879 aaPredicted RBP8.15□□□□□ -1.1
SSBP3-211ENST00000528787 NFKBIAP25963 317 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms