RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CELF5Q8N6W0 485 aaKnown RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 MAGEB6Q8N7X4 407 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 KBTBD3Q8NAB2 608 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 MIGA1Q8NAN2 632 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 AGBL3Q8NEM8 1001 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 PRMT6Q96LA8 375 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 MRGPRX1Q96LB2 322 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 FAM227BQ96M60 508 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 FYTTD1Q96QD9 318 aaKnown RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 CGRRF1Q99675 332 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 FAM118BQ9BPY3 351 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 RIOK1Q9BRS2 568 aaKnown RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 DPCDQ9BVM2 203 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 SPRTNQ9H040 489 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 TAF1DQ9H5J8 278 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 TDRD3Q9H7E2 651 aaKnown RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 MYOZ2Q9NPC6 264 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 DDX4Q9NQI0 724 aaKnown RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 PGAP2Q9UHJ9 254 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 CNOT7Q9UIV1 285 aaKnown RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 ANKRD6Q9Y2G4 727 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 MRPS17Q9Y2R5 130 aaKnown RBP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.46□□□□□ -1.86
CSDE1-208ENST00000524652 RLFQ13129 1914 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 ZFHX4Q86UP3 3567 aa3.46□□□□□ -1.86
CSDE1-208ENST00000524652 MROH7-TTC4A0A0A0MT08 1334 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 MYO3BQ8WXR4 1341 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF532Q9HCE3 1301 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 A0A087WWL8 130 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 GPR75-ASB3A0A0A6YYF3 556 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 CLRN2A0PK11 232 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 BTBD19C9JJ37 291 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 PRKAB2O43741 272 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 EXOC3O60645 756 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 OFD1O75665 1012 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 WDHD1O75717 1129 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 IDH1O75874 414 aaKnown RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 FGBP02675 491 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 PF4V1P10720 104 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 RPS12P25398 132 aaKnown RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 ADORA2AP29274 412 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 EPHX2P34913 555 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 BTDP43251 543 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 FOXG1P55316 489 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 FGL2Q14314 439 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 TNIP1Q15025 636 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 CYP1B1Q16678 543 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 ZIK1Q3SY52 487 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 Q4G0T1 1027 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 C4orf46Q504U0 113 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 RNASE12Q5GAN4 147 aaKnown RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 BMP2KLQ5H9B9 411 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 SLC9C2Q5TAH2 1124 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 LMBRD2Q68DH5 695 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 NAA16Q6N069 864 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 CDC42EP5Q6NZY7 148 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 SERPINA13PQ6UXR4 307 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF517Q6ZMY9 492 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 MRPL10Q7Z7H8 261 aaKnown RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 CAND1Q86VP6 1230 aaKnown RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF280BQ86YH2 543 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 GRAMD1CQ8IYS0 662 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 IZUMO1Q8IYV9 350 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 PRSS3P2Q8NHM4 247 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 TBC1D22AQ8WUA7 517 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 KBTBD7Q8WVZ9 684 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 RILPL2Q969X0 211 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 EVI5LQ96CN4 794 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 ZC3H10Q96K80 434 aaKnown RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 WACQ9BTA9 647 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 BRINP2Q9C0B6 783 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 CIPCQ9C0C6 399 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 ARMT1Q9H993 441 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 TRNAU1APQ9NX07 287 aaKnown RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 AATFQ9NY61 560 aaKnown RBP eCLIP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 RAI14Q9P0K7 980 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 HACL1Q9UJ83 578 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 RPAP1Q9BWH6 1393 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 LOC285556D6RIA3 1793 aa3.45□□□□□ -1.86
CSDE1-208ENST00000524652 SETXQ7Z333 2677 aaKnown RBP3.45□□□□□ -1.86
CSDE1-208ENST00000524652 ZSWIM8A7E2V4 1837 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 TCRBV5S1A1TA0A578 114 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 DDTLA6NHG4 134 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 TCP10L2B9ZVM9 353 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 H3BML4 177 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 SOCS2O14508 198 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 RNF113AO15541 343 aaKnown RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 ABLIM3O94929 683 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 MBD4O95243 580 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 ATP5F1P24539 256 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 CHMLP26374 656 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 IL1R2P27930 398 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 RBM5P52756 815 aaKnown RBP eCLIP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 ARFIP2P53365 341 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 POLGP54098 1239 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 E2F1Q01094 437 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 RABEP1Q15276 862 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 TTF1Q15361 905 aaPredicted RBP3.44□□□□□ -1.86
CSDE1-208ENST00000524652 TWIST1Q15672 202 aa3.44□□□□□ -1.86
CSDE1-208ENST00000524652 FAM187BQ17R55 369 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms