RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 ABCC13Q9NSE7 274 aa12.79□□□□□ -0.36
BRF2-204ENST00000522539 FBXL12Q9NXK8 326 aa12.79□□□□□ -0.36
BRF2-204ENST00000522539 TSPAN16Q9UKR8 245 aa12.79□□□□□ -0.36
BRF2-204ENST00000522539 INTS6Q9UL03 887 aaKnown RBP12.79□□□□□ -0.36
BRF2-204ENST00000522539 FZD4Q9ULV1 537 aa12.79□□□□□ -0.36
BRF2-204ENST00000522539 NCKAP1Q9Y2A7 1128 aa12.79□□□□□ -0.36
BRF2-204ENST00000522539 ATP6V1DQ9Y5K8 247 aa12.79□□□□□ -0.36
BRF2-204ENST00000522539 RAI2Q9Y5P3 530 aa12.79□□□□□ -0.36
BRF2-204ENST00000522539 ARID1BQ8NFD5 2236 aaPredicted RBP12.78□□□□□ -0.36
BRF2-204ENST00000522539 CBX4O00257 560 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 IRAK2O43187 625 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 MSI1O43347 362 aaKnown RBP12.78□□□□□ -0.36
BRF2-204ENST00000522539 SIN3BO75182 1162 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 RHOBTB3O94955 611 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 F13A1P00488 732 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 ITGAVP06756 1048 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 KRT13P13646 458 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 CD38P28907 300 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 SLC6A4P31645 630 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 RXRGP48443 463 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 CCR5P51681 352 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 ADIGQ0VDE8 80 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 BST2Q10589 180 aaKnown RBP12.78□□□□□ -0.36
BRF2-204ENST00000522539 SFSWAPQ12872 951 aaKnown RBP12.78□□□□□ -0.36
BRF2-204ENST00000522539 TARDBPQ13148 414 aaKnown RBP eCLIP12.78□□□□□ -0.36
BRF2-204ENST00000522539 ILKQ13418 452 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 CST6Q15828 149 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 PKDCCQ504Y2 493 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 PRAMEF14Q5SWL7 426 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 C9orf64Q5T6V5 341 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 HES3Q5TGS1 186 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 OR2T34Q8NGX1 318 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 RNF139Q8WU17 664 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 EDEM1Q92611 657 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 TATDN2Q93075 761 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 FAM131CQ96AQ9 280 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 SKA1Q96BD8 255 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 NEUROG2Q9H2A3 272 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 ERVMER34-1Q9H9K5 563 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 CNGB3Q9NQW8 809 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 RAB20Q9NX57 234 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 USP25Q9UHP3 1055 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 RCOR1Q9UKL0 485 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 TPX2Q9ULW0 747 aaKnown RBP12.78□□□□□ -0.36
BRF2-204ENST00000522539 ITIH6Q6UXX5 1313 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 ZNF462Q96JM2 2506 aa12.78□□□□□ -0.36
BRF2-204ENST00000522539 LRRC72A6NJI9 287 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 WNT9AO14904 365 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 MID1O15344 667 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 LATO43561 262 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 GABBR2O75899 941 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 ASLP04424 464 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 MXI1P50539 228 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 NXPH1P58417 271 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 DAOAP59103 153 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 SEMG2Q02383 582 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 ADAM9Q13443 819 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 GOLGA7BQ2TAP0 167 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 NUGGCQ68CJ6 796 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 NADSYN1Q6IA69 706 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 RFWD3Q6PCD5 774 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 PCSK4Q6UW60 755 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 LRRC69Q6ZNQ3 347 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 GUF1Q8N442 669 aaKnown RBP12.77□□□□□ -0.37
BRF2-204ENST00000522539 ZNF843Q8N446 348 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 UBR7Q8N806 425 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 FCRL3Q96P31 734 aaPredicted RBP12.77□□□□□ -0.37
BRF2-204ENST00000522539 MMRN2Q9H8L6 949 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 LRRC4Q9HBW1 653 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 GDF3Q9NR23 364 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 HPSEQ9Y251 543 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 COQ4Q9Y3A0 265 aa12.77□□□□□ -0.37
BRF2-204ENST00000522539 TEX51A0A1B0GUA7 166 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 GOLGA6L7A0A1B0GV03 622 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 A0A1W2PP55 124 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 TARSL2A2RTX5 802 aaKnown RBP12.76□□□□□ -0.37
BRF2-204ENST00000522539 FAM47DPA6NHR8 397 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 RRP8O43159 456 aaKnown RBP12.76□□□□□ -0.37
BRF2-204ENST00000522539 ACSL4O60488 711 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 TBL1XO60907 577 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 RNASEH1O60930 286 aaKnown RBP12.76□□□□□ -0.37
BRF2-204ENST00000522539 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 PLA2G2AP14555 144 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 ABCB4P21439 1286 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 RPL13P26373 211 aaKnown RBP12.76□□□□□ -0.37
BRF2-204ENST00000522539 CSKP41240 450 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 ARRB1P49407 418 aaPredicted RBP12.76□□□□□ -0.37
BRF2-204ENST00000522539 ADPRHP54922 357 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 SKOR2Q2VWA4 1001 aaPredicted RBP12.76□□□□□ -0.37
BRF2-204ENST00000522539 SGO2Q562F6 1265 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 MFN1Q8IWA4 741 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 UNC45BQ8IWX7 931 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 AADATQ8N5Z0 425 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 EID2Q8N6I1 236 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 HJURPQ8NCD3 748 aaPredicted RBP12.76□□□□□ -0.37
BRF2-204ENST00000522539 IRGQQ8WZA9 623 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 FGF11Q92914 225 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 MYEOVQ96EZ4 313 aa12.76□□□□□ -0.37
BRF2-204ENST00000522539 PRICKLE1Q96MT3 831 aaPredicted RBP12.76□□□□□ -0.37
BRF2-204ENST00000522539 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms