RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MIPP30301 263 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 TMPRSS6Q8IU80 811 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 EPS8L1Q8TE68 723 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 INPP5DQ92835 1189 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 APOL2Q9BQE5 337 aa16.55■□□□□ 0.24
USP42-207ENST00000521713 ZCCHC2Q9C0B9 1178 aaKnown RBP16.55■□□□□ 0.24
USP42-207ENST00000521713 SLIT2O94813 1529 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 TNFAIP8O95379 198 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 SELPP16109 830 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 MZF1P28698 734 aaPredicted RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 CSE1LP55060 971 aaKnown RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 INAQ16352 499 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 UGCGQ16739 394 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 SNX30Q5VWJ9 437 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 LRRC55Q6ZSA7 311 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 ANKRD52Q8NB46 1076 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 EPS8L3Q8TE67 593 aaKnown RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 TKTL2Q9H0I9 626 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 SAR1AQ9NR31 198 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 APPL1Q9UKG1 709 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 TRAV19A0A0A6YYK7 116 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 FGF10O15520 208 aaPredicted RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 ARF4P18085 180 aaPredicted RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 CCDC33Q8N5R6 958 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 CENPTQ96BT3 561 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 NEUROG2Q9H2A3 272 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 VANGL2Q9ULK5 521 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 CAB39Q9Y376 341 aaPredicted RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 SESN1Q9Y6P5 492 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 SEPT4O43236 478 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 PCDH8O95206 1070 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 ROR2Q01974 943 aaKnown RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 SMARCB1Q12824 385 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 EEF1DP3Q658K8 133 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 P3H2Q8IVL5 708 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 C2orf49Q9BVC5 232 aaPredicted RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 UBA2Q9UBT2 640 aaPredicted RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 RNF112Q9ULX5 631 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 SIGLEC16A6NMB1 481 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 PRR23D1E9PI22 279 aaPredicted RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 DLGAP3O95886 979 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 PRR23D2P0DMB1 279 aaPredicted RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 AMPD1P23109 780 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 CPA2P48052 419 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 POLR2LP62875 67 aaKnown RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 DLG4P78352 724 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 MGAT5Q09328 741 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 BNC2Q6ZN30 1099 aaPredicted RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 TOP6BLQ8N6T0 577 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 LPCAT1Q8NF37 534 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 RBBP8Q99708 897 aa16.54■□□□□ 0.24
USP42-207ENST00000521713 IARS2Q9NSE4 1012 aaKnown RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 PARP4Q9UKK3 1724 aaKnown RBP16.54■□□□□ 0.24
USP42-207ENST00000521713 PPP1R11O60927 126 aaPredicted RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 RBP1P09455 135 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 FCGR1AP12314 374 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 CHKAP35790 457 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 MPP3Q13368 585 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 SHROOM1Q2M3G4 852 aaPredicted RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 ADAM32Q8TC27 787 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 NMD3Q96D46 503 aaKnown RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 MTMR8Q96EF0 704 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 ZNF556Q9HAH1 456 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 DNMT3LQ9UJW3 386 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 SIK3Q9Y2K2 1263 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 ATXN2Q99700 1313 aaKnown RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 SASH3O75995 380 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 SGCGQ13326 291 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 MEA1Q16626 185 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 SLC26A11Q86WA9 606 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 SELENONQ9NZV5 590 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 SPACA6W5XKT8 324 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 SLCO1B7G3V0H7 640 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 TRUB2O95900 331 aaKnown RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 NUDT2P50583 147 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 CAMK2GQ13555 558 aaPredicted RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 OASLQ15646 514 aaKnown RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 PSMD5Q16401 504 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 PGM2Q96G03 612 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 NCKAP1Q9Y2A7 1128 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 ACOT9Q9Y305 439 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 MRPS23Q9Y3D9 190 aaKnown RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 NPY2RP49146 381 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 NT5DC3Q86UY8 548 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 LPPQ93052 612 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 SKA1Q96BD8 255 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 SGF29Q96ES7 293 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 MAGED4Q96JG8 741 aa16.53■□□□□ 0.24
USP42-207ENST00000521713 NIFKQ9BYG3 293 aaKnown RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 ILKAPQ9H0C8 392 aaPredicted RBP16.53■□□□□ 0.24
USP42-207ENST00000521713 ADGRA2Q96PE1 1338 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 LTBP3Q9NS15 1303 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 FAM95CA0A1B0GW59 222 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 CCNE2O96020 404 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 ASGR1P07306 291 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 HDCP19113 662 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 SLC24A5Q71RS6 500 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 PIGZQ86VD9 579 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 FAM9CQ8IZT9 166 aa16.52■□□□□ 0.24
USP42-207ENST00000521713 PPP1R13LQ8WUF5 828 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms