RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 DUS2Q9NX74 493 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 CWC15Q9P013 229 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 ZNF212Q9UDV6 495 aa12.36□□□□□ -0.43
PDLIM5-220ENST00000514830 MIA3Q5JRA6 1907 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 LRRD1A4D1F6 860 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 CTAGE9A4FU28 777 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 ESPNB1AK53 854 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 FANCGO15287 622 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 HOXC11O43248 304 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 KRT1P04264 644 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 RHOQP17081 205 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 CDKN2BP42772 138 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 IFNAR2P48551 515 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 CDH6P55285 790 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 KRT81Q14533 505 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 TFDP3Q5H9I0 405 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 DCAF12L1Q5VU92 463 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 SPOCD1Q6ZMY3 1216 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 RFX8Q6ZV50 586 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 C14orf80Q86SX3 495 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 NLRP14Q86W24 1093 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 LGI2Q8N0V4 545 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 PYROXD2Q8N2H3 581 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 DNASE1L2Q92874 299 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 TMA16Q96EY4 203 aaKnown RBP12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 ASIC4Q96FT7 647 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 PBKQ96KB5 322 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 RPGRIP1Q96KN7 1286 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 CSPG4P5Q96PW8 444 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 RNF157Q96PX1 679 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 MAGEB5Q9BZ81 275 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 ZYG11BQ9C0D3 744 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 LINC00597Q9H2U6 94 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 CATSPERBQ9H7T0 1116 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 SPHK2Q9NRA0 654 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 TMEM248Q9NWD8 314 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 GPATCH2LQ9NWQ4 482 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 VANGL2Q9ULK5 521 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 TTC7AQ9ULT0 858 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 SNX12Q9UMY4 172 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 PACSIN2Q9UNF0 486 aaPredicted RBP12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 WNT6Q9Y6F9 365 aa12.35□□□□□ -0.43
PDLIM5-220ENST00000514830 NUP205Q92621 2012 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 hCG_1818297A0A087WSY0 165 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 A0A1B0GVM2 712 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 TYW5A2RUC4 315 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 TCAF2A6NFQ2 919 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 EEF2KO00418 725 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 ENC1O14682 589 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 CLDN11O75508 207 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 ADH1CP00326 375 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 CYBBP04839 570 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 ATP1A1P05023 1023 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 CYP17A1P05093 508 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 CD48P09326 243 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 PYGMP11217 842 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 GOT1P17174 413 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 TCP1P17987 556 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 CETN2P41208 172 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 MAPKAPK2P49137 400 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 CDH4P55283 916 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 TPI1P60174 286 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 DHCR24Q15392 516 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 ODF2Q5BJF6 829 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 ANKRD20A8PQ5CZ79 823 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 PPP6R3Q5H9R7 873 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 FYB2Q5VWT5 728 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 SLC9A4Q6AI14 798 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 RFWD3Q6PCD5 774 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 RHBDF2Q6PJF5 856 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 MFSD7Q6UXD7 560 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 YAF2Q8IY57 180 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 RASGEF1CQ8N431 466 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 SLC44A3Q8N4M1 653 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 LZTR1Q8N653 840 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 RTL3Q8N8U3 475 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 IGSF8Q969P0 613 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 C16orf45Q96MC5 204 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 RPRD1AQ96P16 312 aaPredicted RBP12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 RPP25Q9BUL9 199 aaKnown RBP12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 SLC2A11Q9BYW1 496 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 HPS4Q9NQG7 708 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 ARHGEF4Q9NR80 690 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 SLC2A4RGQ9NR83 387 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 STIM2Q9P246 746 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 LIMD1Q9UGP4 676 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 FBXO10Q9UK96 956 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 TBC1D30Q9Y2I9 924 aa12.34□□□□□ -0.43
PDLIM5-220ENST00000514830 CXorf51AA0A1B0GTR3 108 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 DCLK1O15075 740 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 CREB3O43889 395 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 CACNG3O60359 315 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 SRGAP2O75044 1071 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 TNNT1P13805 278 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 GLULP15104 373 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 ZFXP17010 805 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 HOXD9P28356 352 aaPredicted RBP12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 EPHB2P29323 1055 aa12.33□□□□□ -0.44
PDLIM5-220ENST00000514830 GDI1P31150 447 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms