RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 LRRC72A6NJI9 287 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 TBL1XO60907 577 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 LCP1P13796 627 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 NUDT1P36639 197 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 FMO5P49326 533 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 CCR5P51681 352 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 OXCT1P55809 520 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 GCNT1Q02742 428 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 SMAD1Q15797 465 aaKnown RBP13.04□□□□□ -0.32
VEGFA-216ENST00000512683 FAM133BQ5BKY9 247 aaKnown RBP13.04□□□□□ -0.32
VEGFA-216ENST00000512683 KIAA0895LQ68EN5 471 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 TMEM270Q6UE05 265 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 TMPRSS12Q86WS5 348 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 MFN1Q8IWA4 741 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 PDCD7Q8N8D1 485 aaKnown RBP13.04□□□□□ -0.32
VEGFA-216ENST00000512683 ACE2Q9BYF1 805 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-216ENST00000512683 PABPC3Q9H361 631 aaKnown RBP13.04□□□□□ -0.32
VEGFA-216ENST00000512683 TOR4AQ9NXH8 423 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 FZD4Q9ULV1 537 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 PCDHB4Q9Y5E5 795 aa13.04□□□□□ -0.32
VEGFA-216ENST00000512683 C10orf142B7Z368 130 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 BIN1O00499 593 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 FSBPO95073 299 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 GNA14O95837 355 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 ATXN1LP0C7T5 689 aaKnown RBP13.03□□□□□ -0.32
VEGFA-216ENST00000512683 CD70P32970 193 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 NNMTP40261 264 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
VEGFA-216ENST00000512683 C21orf59P57076 290 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 ACAP1Q15027 740 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 KLHL10Q6JEL2 608 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 ADAT2Q7Z6V5 191 aaKnown RBP13.03□□□□□ -0.32
VEGFA-216ENST00000512683 OR2T34Q8NGX1 318 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 LMO3Q8TAP4 145 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 NELFBQ8WX92 580 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 TFAP2BQ92481 460 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 SNX19Q92543 992 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 SLC39A13Q96H72 371 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 FAM81BQ96LP2 452 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 MED15Q96RN5 788 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 ORAI3Q9BRQ5 295 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 KDM4CQ9H3R0 1056 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 TMEM51Q9NW97 253 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 FBXL12Q9NXK8 326 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 SLC12A6Q9UHW9 1150 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 CNTN6Q9UQ52 1028 aa13.03□□□□□ -0.32
VEGFA-216ENST00000512683 FASNP49327 2511 aaKnown RBP13.02□□□□□ -0.32
VEGFA-216ENST00000512683 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.32
VEGFA-216ENST00000512683 A0A1B0GTQ1 180 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 EDDM13A0A1B0GTR0 161 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 MSI1O43347 362 aaKnown RBP13.02□□□□□ -0.33
VEGFA-216ENST00000512683 GABBR2O75899 941 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 IGHV4-34P06331 123 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 SLC2A3P11169 496 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 C5AR1P21730 350 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 CSKP41240 450 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 GPD2P43304 727 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 GALCP54803 685 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 SULT2A1Q06520 285 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 LRMPQ12912 555 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 COL9A2Q14055 689 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-216ENST00000512683 CST6Q15828 149 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 SLC45A4Q5BKX6 768 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 MS4A13Q5J8X5 152 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 C9orf64Q5T6V5 341 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 RFWD3Q6PCD5 774 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 SCUBE3Q8IX30 993 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 PPM1KQ8N3J5 372 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 EHBP1Q8NDI1 1231 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 GANCQ8TET4 914 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 MYO19Q96H55 970 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 FCRL2Q96LA5 508 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-216ENST00000512683 ELF4Q99607 663 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-216ENST00000512683 ERVMER34-1Q9H9K5 563 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 CTNND2Q9UQB3 1225 aa13.02□□□□□ -0.33
VEGFA-216ENST00000512683 GOLGA6L7A0A1B0GV03 622 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 TRABD2BA6NFA1 517 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 H0Y8X5 98 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 M0QYV0 167 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 RNF225M0QZC1 329 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-216ENST00000512683 MED7O43513 233 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 MAGEC1O60732 1142 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 SIN3BO75182 1162 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 ADH1BP00325 375 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 GOT1P17174 413 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 SLC6A4P31645 630 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 SLC8A1P32418 973 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 PLK1P53350 603 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 ECT2LQ008S8 904 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 OVGP1Q12889 678 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 CDH18Q13634 790 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 RNF219Q5W0B1 726 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-216ENST00000512683 NADSYN1Q6IA69 706 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 SND1Q7KZF4 910 aaKnown RBP eCLIP13.01□□□□□ -0.337e-20■□□□□ 9.3
VEGFA-216ENST00000512683 ENOSF1Q7L5Y1 443 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 TMEM110Q86TL2 294 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 TRIM59Q8IWR1 403 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 CACTIN-AS1Q8N1I8 211 aa13.01□□□□□ -0.33
VEGFA-216ENST00000512683 OXR1Q8N573 874 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms