RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 FAM35AQ86V20 835 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 NPAS4Q8IUM7 802 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 LRRC52Q8N7C0 313 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 NAT16Q8N8M0 369 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 C12orf29Q8N999 325 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 SERPINB12Q96P63 405 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 ZIM3Q96PE6 472 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 UNKQ9C0B0 810 aaKnown RBP7.33□□□□□ -1.24
KDM3B-207ENST00000510866 CCDC90BQ9GZT6 254 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 PCDH9Q9HC56 1237 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 EVA1BQ9NVM1 165 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 NDOR1Q9UHB4 597 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 ARL2BPQ9Y2Y0 163 aa7.33□□□□□ -1.24
KDM3B-207ENST00000510866 SIGLEC16A6NMB1 481 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 EVPLLA8MZ36 301 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 CCNT2O60583 730 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 MAPK1P28482 360 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 PGM1P36871 562 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 NPY2RP49146 381 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 OCA2Q04671 838 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ITGA9Q13797 1035 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 TCEA2Q15560 299 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 KCNT2Q6UVM3 1135 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 MFSD7Q6UXD7 560 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 CPA6Q8N4T0 437 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 TRIML2Q8N7C3 387 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 TUBGCP3Q96CW5 907 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 YIPF3Q9GZM5 350 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 GID8Q9NWU2 228 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 TSPAN1O60635 241 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 OR4Q2P0C623 313 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 HSD17B3P37058 310 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 CCNG1P51959 295 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 XRCC4Q13426 336 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 NLRP9Q7RTR0 991 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 SYTL1Q8IYJ3 562 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 SMG7Q92540 1137 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 TCF25Q9BQ70 676 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 AKAP7Q9P0M2 348 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ZNF510Q9Y2H8 683 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 SNX5Q9Y5X3 404 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ERI2A8K979 691 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 NEDD8-MDP1E9PL57 170 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 GPR25O00155 361 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 KLHL2O95198 593 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 LYPLA2O95372 231 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 IL1BP01584 269 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 PGAM1P18669 254 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 CYP2C18P33260 490 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 CD151P48509 253 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 CENPAP49450 140 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 FPGSQ05932 587 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 MRPL28Q13084 256 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 PPP1R26Q5T8A7 1209 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 LAYNQ6UX15 382 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 SH3RF1Q7Z6J0 888 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 KCNMB4Q86W47 210 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 TRAPPC5Q8IUR0 188 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ZSWIM2Q8NEG5 633 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 EPS8L3Q8TE67 593 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ZBTB10Q96DT7 871 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 PAFAH2Q99487 392 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ILKAPQ9H0C8 392 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 AASDHPPTQ9NRN7 309 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 DDX28Q9NUL7 540 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 SHOC2Q9UQ13 582 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 PCDHA3Q9Y5H8 950 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ADAMTSL3P82987 1691 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 BAZ2BQ9UIF8 2168 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 GNG14A0A1W2PPG7 69 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 DYTNA2CJ06 578 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 MEI4A8MW99 385 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 TLR5O60602 858 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 RPN2P04844 631 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 RBP1P09455 135 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 HLA-DPA1P20036 260 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 MGAT5Q09328 741 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 IRAK1BP1Q5VVH5 260 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 MARK2Q7KZI7 788 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 DUSP16Q9BY84 665 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 NIFKQ9BYG3 293 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 PDZD7Q9H5P4 517 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ACP6Q9NPH0 428 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 RGS18Q9NS28 235 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 CFAP97Q9P2B7 532 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 APPL1Q9UKG1 709 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 MAFBQ9Y5Q3 323 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ZNF142P52746 1687 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 XPO1O14980 1071 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 PYGMP11217 842 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 TNNI3P19429 210 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 CNTFP26441 200 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 CD86P42081 329 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 MAMLD1Q13495 774 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 INSCQ1MX18 579 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 ZC3H12BQ5HYM0 836 aaKnown RBP7.32□□□□□ -1.24
KDM3B-207ENST00000510866 SPANXN3Q5MJ09 141 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 PRKD2Q9BZL6 878 aa7.32□□□□□ -1.24
KDM3B-207ENST00000510866 LACRTQ9GZZ8 138 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms