RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ARPINQ7Z6K5 226 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 HASPINQ8TF76 798 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 ASB2Q96Q27 587 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 APBA2Q99767 749 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 TBL1YQ9BQ87 522 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 PTPRHQ9HD43 1115 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 AHSPQ9NZD4 102 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 CCDC167Q9P0B6 97 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 PRR23AA6NEV1 266 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 CENPXA8MT69 81 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 HOXA2O43364 376 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 VIL1P09327 827 aaKnown RBP10.81□□□□□ -0.68
NEK1-206ENST00000510533 TNFRSF8P28908 595 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 TGM3Q08188 693 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 STARD3Q14849 445 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 SLC45A4Q5BKX6 768 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 CBWD3Q5JTY5 395 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 CBWD5Q5RIA9 395 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 PDZK1Q5T2W1 519 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 INTS5Q6P9B9 1019 aaKnown RBP10.81□□□□□ -0.68
NEK1-206ENST00000510533 EXOC3L1Q86VI1 746 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 ST13P5Q8NFI4 369 aaPredicted RBP10.81□□□□□ -0.68
NEK1-206ENST00000510533 ZSCAN18Q8TBC5 510 aaPredicted RBP10.81□□□□□ -0.68
NEK1-206ENST00000510533 METTL6Q8TCB7 284 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 DLG3Q92796 817 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 LRRC39Q96DD0 335 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 TMEM106CQ9BVX2 250 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 POMKQ9H5K3 350 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 SNX8Q9Y5X2 465 aa10.81□□□□□ -0.68
NEK1-206ENST00000510533 SEC22BO75396 215 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 TFRCP02786 760 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 MIPP30301 263 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 RPA3P35244 121 aaPredicted RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 FEN1P39748 380 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 C21orf59P57076 290 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 MSLNQ13421 630 aaPredicted RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 MFSD4BQ5TF39 518 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 SCARA3Q6AZY7 606 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ZNF544Q6NX49 715 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 OTOP1Q7RTM1 612 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 PLEKHH3Q7Z736 793 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 EPHX4Q8IUS5 362 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 LZTR1Q8N653 840 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 DNERQ8NFT8 737 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 CKAP2Q8WWK9 683 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 TLR8Q9NR97 1041 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 NRXN1Q9ULB1 1477 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 DDTLA6NHG4 134 aaPredicted RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 ABCB1P08183 1280 aaPredicted RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 CLTBP09497 229 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 DPEP1P16444 411 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ZNF7P17097 686 aaPredicted RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 ITGB6P18564 788 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 EIF4BP23588 611 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 DNAJB2P25686 324 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 GTF2A2P52657 109 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 GRIK3Q13003 919 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 FRG1Q14331 258 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 KCNT2Q6UVM3 1135 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ILDR1Q86SU0 546 aaPredicted RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 PHACTR4Q8IZ21 702 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ACTRT2Q8TDY3 377 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 OSMRQ99650 979 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 REXO4Q9GZR2 422 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 RIBC2Q9H4K1 309 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ASB7Q9H672 318 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 KCND1Q9NSA2 647 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 FAM86B1E9PN63 330 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 RPLP2P05387 115 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 FAM86B2P0C5J1 330 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 HPGDP15428 266 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 EIF2B2P49770 351 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 SLC6A3Q01959 620 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ST3GAL1Q11201 340 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 MILR1Q7Z6M3 343 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 CDK20Q8IZL9 346 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ITFG1Q8TB96 612 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ELMO3Q96BJ8 720 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 CDK5RAP1Q96SZ6 601 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 OLFM1Q99784 485 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 IL17RBQ9NRM6 502 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 BLOC1S4Q9NUP1 217 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ADPRHL2Q9NX46 363 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 A0A087X1B8 175 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 CASTOR2A6NHX0 329 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 FYNP06241 537 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 PABPC1P11940 636 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 PAX7P23759 505 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 DSG3P32926 999 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 TUBP50607 506 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 RPL14P50914 215 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 TBX4P57082 545 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 MAPK11Q15759 364 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 BRSK2Q8IWQ3 736 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 FAM45AQ8TCE6 357 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 ANKRD49Q8WVL7 239 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 TPD52L3Q96J77 140 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 SEMA6AQ9H2E6 1030 aa10.8□□□□□ -0.68
NEK1-206ENST00000510533 STN1Q9H668 368 aaKnown RBP10.8□□□□□ -0.68
NEK1-206ENST00000510533 RNPEPL1Q9HAU8 725 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms