RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 HPS4Q9NQG7 708 aa13.15□□□□□ -0.3
CDK7-204ENST00000506563 CWC15Q9P013 229 aaKnown RBP13.15□□□□□ -0.3
CDK7-204ENST00000506563 STOML2Q9UJZ1 356 aa13.15□□□□□ -0.3
CDK7-204ENST00000506563 KIF26AQ9ULI4 1882 aaPredicted RBP13.14□□□□□ -0.31
CDK7-204ENST00000506563 MYOFQ9NZM1 2061 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 TICRRQ7Z2Z1 1910 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 OTOL1A6NHN0 477 aaPredicted RBP13.14□□□□□ -0.31
CDK7-204ENST00000506563 DLL1O00548 723 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 ZRANB2O95218 330 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDK7-204ENST00000506563 TYRP14679 529 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 AMPD1P23109 780 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 CXCR5P32302 372 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 SOX9P48436 509 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 DYNLT1P63172 113 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 NR1H3Q13133 447 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 RUNX3Q13761 415 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 PDK2Q15119 407 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 ALFQ53S48 1182 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 MFSD7Q6UXD7 560 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 SYT10Q6XYQ8 523 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 RFX6Q8HWS3 928 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 MAP7D3Q8IWC1 876 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 FAM217AQ8IXS0 508 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 ZNF683Q8IZ20 524 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 ZNF592Q92610 1267 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 NXPE3Q969Y0 559 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 P2RY11Q96G91 374 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 CSPG4P5Q96PW8 444 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 TLR10Q9BXR5 811 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 ZYG11BQ9C0D3 744 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 ECT2Q9H8V3 914 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 DNAI1Q9UI46 699 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 JRKLQ9Y4A0 524 aa13.14□□□□□ -0.31
CDK7-204ENST00000506563 CUL9Q8IWT3 2517 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 H0Y626 953 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 PYGMP11217 842 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 KRT10P13645 584 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 CASQ1P31415 396 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 PEX5P50542 639 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 ARSEP51690 589 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 GAD2Q05329 585 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 KDSRQ06136 332 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 SEMA3BQ13214 749 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 TDGQ13569 410 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 CDH18Q13634 790 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 ITPRIPL2Q3MIP1 535 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 SEL1L2Q5TEA6 688 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 MANEALQ5VSG8 457 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 DCAF12L1Q5VU92 463 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 FYB2Q5VWT5 728 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 SPOCD1Q6ZMY3 1216 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 ANKS1BQ7Z6G8 1248 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 MFN1Q8IWA4 741 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 CCDC117Q8IWD4 279 aaPredicted RBP13.13□□□□□ -0.31
CDK7-204ENST00000506563 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK7-204ENST00000506563 RCOR2Q8IZ40 523 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 NETO2Q8NC67 525 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 EXD1Q8NHP7 514 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.13□□□□□ -0.31
CDK7-204ENST00000506563 RBM41Q96IZ5 413 aaKnown RBP13.13□□□□□ -0.31
CDK7-204ENST00000506563 NAPGQ99747 312 aaPredicted RBP13.13□□□□□ -0.31
CDK7-204ENST00000506563 HEMGNQ9BXL5 484 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 MAK16Q9BXY0 300 aaKnown RBP13.13□□□□□ -0.31
CDK7-204ENST00000506563 MFHAS1Q9Y4C4 1052 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 COL6A3P12111 3177 aa13.13□□□□□ -0.31
CDK7-204ENST00000506563 MYO10Q9HD67 2058 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 CTAGE9A4FU28 777 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 C3orf70A6NLC5 250 aaPredicted RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 DRGXA6NNA5 263 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 ERCC2P18074 760 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 HOXD9P28356 352 aaPredicted RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 CETN2P41208 172 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 CDKN2BP42772 138 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 NRG1Q02297 640 aaPredicted RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 ZNF177Q13360 481 aaPredicted RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 ANKRD20A8PQ5CZ79 823 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 TTC39BQ5VTQ0 682 aaPredicted RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 NAIF1Q69YI7 327 aaPredicted RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 ZNF354CQ86Y25 554 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 RNF135Q8IUD6 432 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 KIAA1958Q8N8K9 716 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 WFDC5Q8TCV5 224 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 ZNF670Q9BS34 389 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 CATSPERBQ9H7T0 1116 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 ARHGEF4Q9NR80 690 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 HEBP1Q9NRV9 189 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 ETNK2Q9NVF9 386 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 DNAJC17Q9NVM6 304 aaKnown RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 PPARGC1AQ9UBK2 798 aaKnown RBP13.12□□□□□ -0.31
CDK7-204ENST00000506563 CLEC4EQ9ULY5 219 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 NEU3Q9UQ49 428 aa13.12□□□□□ -0.31
CDK7-204ENST00000506563 IGLV3-10A0A075B6K4 115 aa13.11□□□□□ -0.31
CDK7-204ENST00000506563 A0A1B0GVM2 712 aa13.11□□□□□ -0.31
CDK7-204ENST00000506563 TCAF2A6NFQ2 919 aa13.11□□□□□ -0.31
CDK7-204ENST00000506563 C19orf67A6NJJ6 358 aa13.11□□□□□ -0.31
CDK7-204ENST00000506563 ARNTLO00327 626 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms