RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 HPS3Q969F9 1004 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 IFT43Q96FT9 208 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 MRPL45Q9BRJ2 306 aaKnown RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 CBWD1Q9BRT8 395 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 NACA2Q9H009 215 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 XYLT2Q9H1B5 865 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 PABPC3Q9H361 631 aaKnown RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 MRPL44Q9H9J2 332 aaKnown RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 EBF2Q9HAK2 575 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 PRSS16Q9NQE7 514 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 FBXO2Q9UK22 296 aaPredicted RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 SMC3Q9UQE7 1217 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 NCKAP1Q9Y2A7 1128 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 KIF3AQ9Y496 699 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 PCDHA5Q9Y5H7 936 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 USP3Q9Y6I4 520 aa6.29□□□□□ -1.4
GYPB-204ENST00000504951 USP9YO00507 2555 aaPredicted RBP6.29□□□□□ -1.4
GYPB-204ENST00000504951 CREBBPQ92793 2442 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 TARSL2A2RTX5 802 aaKnown RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 ENO4A6NNW6 628 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 A8MXQ7 604 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 HHLA1C9JL84 531 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 RNF225M0QZC1 329 aaPredicted RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 CBX4O00257 560 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 CLDN5O00501 218 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 MAN1A2O60476 641 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 PRPF6O94906 941 aaKnown RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 FSBPO95073 299 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 LATS1O95835 1130 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 BMP15O95972 392 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 CYBBP04839 570 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 ATP5BP06576 529 aaKnown RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 DLDP09622 509 aaKnown RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 HOXD13P35453 343 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 PGFP49763 221 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 DUSP3P51452 185 aaPredicted RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 CLDN6P56747 220 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 GABREP78334 506 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 KCNMA1Q12791 1236 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 BNIP3Q12983 259 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 KCNJ12Q14500 433 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 WDR72Q3MJ13 1102 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 LINC00303Q3SY05 128 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 ERICH6BQ5W0A0 696 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 ZNF776Q68DI1 518 aaPredicted RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 CCDC81Q6ZN84 652 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 CCDC186Q7Z3E2 898 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 FAM35AQ86V20 835 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 UNC93AQ86WB7 457 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 SLC25A45Q8N413 288 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 OR4C6Q8NH72 309 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 WDR48Q8TAF3 677 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 TMEM174Q8WUU8 243 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 SYAP1Q96A49 352 aaPredicted RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 VCPIP1Q96JH7 1222 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 SLC6A18Q96N87 628 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 CDK15Q96Q40 435 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 CCNL2Q96S94 520 aaPredicted RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 SMOQ99835 787 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 PANK2Q9BZ23 570 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 UBXN6Q9BZV1 441 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 PCIF1Q9H4Z3 704 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 OSER1Q9NX31 292 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 PLK2Q9NYY3 685 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 ATXN7L1Q9ULK2 861 aaPredicted RBP6.28□□□□□ -1.4
GYPB-204ENST00000504951 DMTF1Q9Y222 760 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 PCDHB1Q9Y5F3 818 aa6.28□□□□□ -1.4
GYPB-204ENST00000504951 VPS37CA5D8V6 355 aaPredicted RBP6.27□□□□□ -1.41
GYPB-204ENST00000504951 TRIM38O00635 465 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 EFSO43281 561 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 USP12O75317 370 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 TCEA3O75764 348 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 AP1G2O75843 785 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 GCNT3O95395 438 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 SLFN14P0C7P3 912 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 GIMD1P0DJR0 217 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 IRF1P10914 325 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 RALAP11233 206 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 RARGP13631 454 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 IDEP14735 1019 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 HLA-FP30511 346 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 CCR10P46092 362 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 KIF11P52732 1056 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 AP3M2P53677 418 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 TNNC1P63316 161 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 CLDN10P78369 228 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 IL9RQ01113 521 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 CEBPZQ03701 1054 aaKnown RBP6.27□□□□□ -1.41
GYPB-204ENST00000504951 PSMD6Q15008 389 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 TRIP4Q15650 581 aaPredicted RBP6.27□□□□□ -1.41
GYPB-204ENST00000504951 ISXQ2M1V0 245 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 HNRNPA1L2Q32P51 320 aaKnown RBP6.27□□□□□ -1.41
GYPB-204ENST00000504951 MPPE1Q53F39 396 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 RRAGBQ5VZM2 374 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 NAPEPLDQ6IQ20 393 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 KDM7AQ6ZMT4 941 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 PRICKLE2Q7Z3G6 844 aa6.27□□□□□ -1.41
GYPB-204ENST00000504951 BRAPQ7Z569 592 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms