RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ITIH5Q86UX2 942 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 LZTR1Q8N653 840 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 SCAMP5Q8TAC9 235 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 TRIM54Q9BYV2 358 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 NHSQ6T4R5 1651 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 F8W8V4 182 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 SUPT7LO94864 414 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 STMN1P16949 149 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 SOX11P35716 441 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 KPNA1P52294 538 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-207ENST00000504761 CSHL1Q14406 222 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 ZNF470Q6ECI4 717 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 P2RY11Q96G91 374 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 CD274Q9NZQ7 290 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 KIF3CO14782 793 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 DAB1O75553 588 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 SKAP2O75563 359 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-207ENST00000504761 SRP72O76094 671 aaKnown RBP14.43□□□□□ -0.1
TCOF1-207ENST00000504761 AARSP49588 968 aaKnown RBP eCLIP14.43□□□□□ -0.12e-6■■■□□ 15.7
TCOF1-207ENST00000504761 NRLP54845 237 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 AUHQ13825 339 aaKnown RBP14.43□□□□□ -0.1
TCOF1-207ENST00000504761 FAM83EQ2M2I3 478 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 FBXW10Q5XX13 1052 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 SLC26A9Q7LBE3 791 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 CTU1Q7Z7A3 348 aaKnown RBP14.43□□□□□ -0.1
TCOF1-207ENST00000504761 PLD5Q8N7P1 536 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 ZMAT2Q96NC0 199 aaKnown RBP14.43□□□□□ -0.1
TCOF1-207ENST00000504761 CORO1BQ9BR76 489 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 SDCBP2Q9H190 292 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 NSMCE4AQ9NXX6 385 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 BAG5Q9UL15 447 aa14.43□□□□□ -0.1
TCOF1-207ENST00000504761 C2CD4BA6NLJ0 364 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 CCT8L1PA6NM43 557 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 PYGLP06737 847 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 INTS6LQ5JSJ4 861 aaKnown RBP14.42□□□□□ -0.1
TCOF1-207ENST00000504761 KCNMB4Q86W47 210 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 ZC3H3Q8IXZ2 948 aaKnown RBP14.42□□□□□ -0.1
TCOF1-207ENST00000504761 KLHL5Q96PQ7 755 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 PTPN18Q99952 460 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 UBXN6Q9BZV1 441 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 FAM96AQ9H5X1 160 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 TRHDEQ9UKU6 1024 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 ADGRA2Q96PE1 1338 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 TIMM44O43615 452 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 PAGE1O75459 146 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 CCNB1P14635 433 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 PTPN7P35236 360 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 ATXN3P54252 364 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-207ENST00000504761 PARP6Q2NL67 630 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 TM6SF2Q9BZW4 377 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 IGFLR1Q9H665 355 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 PLK2Q9NYY3 685 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 GMIPQ9P107 970 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 ADAM28Q9UKQ2 775 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 HACD1B0YJ81 288 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 ATP5HO75947 161 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 MT-CO1P00395 513 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 KCNA4P22459 653 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 ADRA1DP25100 572 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 MMP13P45452 471 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 PDCD2Q16342 344 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-207ENST00000504761 GRAMD1BQ3KR37 738 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 SGO1Q5FBB7 561 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 C16orf46Q6P387 395 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 MON1AQ86VX9 555 aa14.42□□□□□ -0.1
TCOF1-207ENST00000504761 HNRNPABQ99729 332 aaKnown RBP14.42□□□□□ -0.1
TCOF1-207ENST00000504761 MYADML2A6NDP7 307 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 FOXO6A8MYZ6 492 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 DGKIO75912 1065 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 SMAD3P84022 425 aaKnown RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 LAMB3Q13751 1172 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 CA9Q16790 459 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 HERC6Q8IVU3 1022 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 FNIP1Q8TF40 1166 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 SH3KBP1Q96B97 665 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 ACOT9Q9Y305 439 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 STYXL1Q9Y6J8 313 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 C4AP0C0L4 1744 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 FANCGO15287 622 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 GLRA3O75311 464 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 CKBP12277 381 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 TKTP29401 623 aaKnown RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 TLE2Q04725 743 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 LBRQ14739 615 aaKnown RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 TTC23LQ6PF05 361 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 ZCCHC23Q6ZST2 131 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 STRADAQ7RTN6 431 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 PGBD3Q8N328 593 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 TMEM199Q8N511 208 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 DQX1Q8TE96 717 aaKnown RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 PGM2Q96G03 612 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 HAPLN2Q9GZV7 340 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 GPAMQ9HCL2 828 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 HEY2Q9UBP5 337 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 CD86P42081 329 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 PEX5P50542 639 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 PPM1LQ5SGD2 360 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 VARS2Q5ST30 1063 aaKnown RBP14.41□□□□□ -0.1
TCOF1-207ENST00000504761 RETSATQ6NUM9 610 aa14.41□□□□□ -0.1
TCOF1-207ENST00000504761 FOXR1Q6PIV2 292 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms