RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 COG5Q9UP83 839 aa6.12□□□□□ -1.43
LINC01340-201ENST00000504012 SHOC2Q9UQ13 582 aa6.12□□□□□ -1.43
LINC01340-201ENST00000504012 DLEC1Q9Y238 1755 aa6.12□□□□□ -1.43
LINC01340-201ENST00000504012 PTPN22Q9Y2R2 807 aa6.12□□□□□ -1.43
LINC01340-201ENST00000504012 MARF1Q9Y4F3 1742 aaKnown RBP6.12□□□□□ -1.43
LINC01340-201ENST00000504012 PCDHGB5Q9Y5G0 923 aa6.12□□□□□ -1.43
LINC01340-201ENST00000504012 PPP2R3BQ9Y5P8 575 aa6.12□□□□□ -1.43
LINC01340-201ENST00000504012 CSNK1G3Q9Y6M4 447 aa6.12□□□□□ -1.43
LINC01340-201ENST00000504012 MAU2Q9Y6X3 613 aa6.12□□□□□ -1.43
LINC01340-201ENST00000504012 ADAMTSL3P82987 1691 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 PRR36Q9H6K5 1346 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 C7orf72A4D263 438 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 SAC3D1A6NKF1 404 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 GSG1L2A8MUP6 293 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 POC1B-GALNT4F8VUJ3 575 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 H7C0C1 242 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TK2O00142 265 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TAF4O00268 1085 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 PDXKO00764 312 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 SNPHO15079 494 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 SULT1B1O43704 296 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 CALUO43852 315 aaPredicted RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 MAN1A2O60476 641 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 LPXNO60711 386 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 KRT37O76014 449 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 PTTG1O95997 202 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 PROCP04070 461 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 HMGN1P05114 100 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 RPS17P08708 135 aaKnown RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 RALBP11234 206 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 BMP2P12643 396 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 CDH1P12830 882 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 PRKACAP17612 351 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TATP17735 454 aaPredicted RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 PTPN1P18031 435 aaKnown RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 SLC9A1P19634 815 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 COMTP21964 271 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 RBL1P28749 1068 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 HOXC9P31274 260 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 GRK3P35626 688 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ETFBP38117 255 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 SLC26A3P40879 764 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 CASP3P42574 277 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 OR3A3P47888 321 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 NUMBP49757 651 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 RGS7P49802 495 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ETV1P50549 477 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ALDH18A1P54886 795 aaKnown RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 AQP5P55064 265 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 NME5P56597 212 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 NLRP11P59045 1033 aaKnown RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 OLR1P78380 273 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 GALK2Q01415 458 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ILF2Q12905 390 aaKnown RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TRAF2Q12933 501 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TRIM32Q13049 653 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 PDIA2Q13087 525 aaKnown RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 GRB10Q13322 594 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 SLC12A1Q13621 1099 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TFDP1Q14186 410 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 CBX2Q14781 532 aaPredicted RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 RAB39AQ14964 217 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ZNF181Q2M3W8 571 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 BBS9Q3SYG4 887 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ESCO2Q56NI9 601 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 NHSL2Q5HYW2 709 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 HABP4Q5JVS0 413 aaKnown RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 INTS11Q5TA45 600 aaKnown RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 LGSNQ5TDP6 509 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 GPR107Q5VW38 600 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 C16orf46Q6P387 395 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TTC33Q6PID6 262 aaPredicted RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 PAOXQ6QHF9 649 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 PRR23BQ6ZRT6 265 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TOM1L2Q6ZVM7 507 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 LRP10Q7Z4F1 713 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 CDR2LQ86X02 465 aaPredicted RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 LIX1LQ8IVB5 337 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 GLYCTKQ8IVS8 523 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 CCDC60Q8IWA6 550 aaPredicted RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 SEPT12Q8IYM1 358 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 DEFB107AQ8IZN7 70 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 MTMR14Q8NCE2 650 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 NPLOC4Q8TAT6 608 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ADAMTS19Q8TE59 1207 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 DCAKDQ8WVC6 231 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ANKRD49Q8WVL7 239 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 CIDECQ96AQ7 238 aaPredicted RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 DNAJC19Q96DA6 116 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 EEF2KMTQ96G04 330 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 CEP170P1Q96L14 293 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ZNF512Q96ME7 567 aaPredicted RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 ZNF560Q96MR9 790 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 RILPQ96NA2 401 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 SERINC2Q96SA4 455 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 SLC29A1Q99808 456 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 AGPAT1Q99943 283 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TMEM79Q9BSE2 394 aa6.11□□□□□ -1.43
LINC01340-201ENST00000504012 TRAF4Q9BUZ4 470 aaPredicted RBP6.11□□□□□ -1.43
LINC01340-201ENST00000504012 RHOBTB2Q9BYZ6 727 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms