RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 MIPP30301 263 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 CD70P32970 193 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 KIR2DL1P43626 348 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 NUBP1P53384 320 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 AIF1P55008 147 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 GSDMDP57764 484 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 NRG1Q02297 640 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 CDH18Q13634 790 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 PIGHQ14442 188 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 ACAP1Q15027 740 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 SPA17Q15506 151 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 FAM72AQ5TYM5 149 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 MANEALQ5VSG8 457 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 FAM72DQ6L9T8 149 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 LRRC31Q6UY01 552 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 ANKS1BQ7Z6G8 1248 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 KIAA0907Q7Z7F0 614 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 FAM72BQ86X60 149 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 SPEM1Q8N4L4 309 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 NIPA2Q8N8Q9 360 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 ZNF557Q8N988 423 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 RPLP0P6Q8NHW5 317 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 CCDC26Q8TAB7 109 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 PEBP4Q96S96 227 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 OSGEPQ9NPF4 335 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 SPATA6Q9NWH7 488 aaPredicted RBP18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 C2orf42Q9NWW7 574 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 OR12D3Q9UGF7 316 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 PCSK1NQ9UHG2 260 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 GGA2Q9UJY4 613 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 PCDHA13Q9Y5I0 950 aa18.39■□□□□ 0.53
CCHCR1-216ENST00000502557 CHURC1-FNTBB4DL54 471 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 H0Y626 953 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 MYO1FO00160 1098 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 GALR2O43603 387 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 CNTN5O94779 1100 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 PABPC1P11940 636 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 PCK1P35558 622 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 MRPS21P82921 87 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 LMAN2Q12907 356 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 ALFQ53S48 1182 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 C2orf27AQ580R0 203 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 FSCBQ5H9T9 825 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 EFHC2Q5JST6 749 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 DAB2IPQ5VWQ8 1189 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 TMEM215Q68D42 235 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 MAMSTRQ6ZN01 415 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 CYP4V2Q6ZWL3 525 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 CHST9Q7L1S5 443 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 C1orf210Q8IVY1 113 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 CCDC117Q8IWD4 279 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 PYROXD2Q8N2H3 581 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 SLC35G2Q8TBE7 412 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 RFFLQ8WZ73 363 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 NCAPGQ9BPX3 1015 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 GPATCH2LQ9NWQ4 482 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 MPP6Q9NZW5 540 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 STARD13Q9Y3M8 1113 aa18.38■□□□□ 0.53
CCHCR1-216ENST00000502557 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 CLDN11O75508 207 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 LRIG2O94898 1065 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 TCF4P15884 667 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 TIE1P35590 1138 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 MRE11P49959 708 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 CDH4P55283 916 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 TCEAL1Q15170 157 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 EGFLAMQ63HQ2 1017 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 CXorf57Q6NSI4 855 aaKnown RBP18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 ADIPOR2Q86V24 386 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 RHOT2Q8IXI1 618 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 IL17RCQ8NAC3 791 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 WFIKKN2Q8TEU8 576 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 SNRNP25Q9BV90 132 aaKnown RBP18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 ZDHHC4Q9NPG8 344 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 POLR3BQ9NW08 1133 aaPredicted RBP18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 PPARGC1AQ9UBK2 798 aaKnown RBP18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 USP18Q9UMW8 372 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 TFR2Q9UP52 801 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 NEU3Q9UQ49 428 aa18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 REXO2Q9Y3B8 237 aaKnown RBP18.37■□□□□ 0.53
CCHCR1-216ENST00000502557 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 ATG13O75143 517 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 MTA2O94776 668 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 PROSCO94903 275 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 KLF8O95600 359 aaPredicted RBP18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 IL1R2P27930 398 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 L1CAMP32004 1257 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 SATB1Q01826 763 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 SEMA3BQ13214 749 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 ZNF177Q13360 481 aaPredicted RBP18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 EIF4HQ15056 248 aaKnown RBP18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 CA9Q16790 459 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 FUT11Q495W5 492 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 ERMARDQ5T6L9 678 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 CPNE8Q86YQ8 564 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 MAML2Q8IZL2 1156 aaPredicted RBP18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 AHI1Q8N157 1196 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 CCDC33Q8N5R6 958 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 ALLCQ8N6M5 410 aa18.36■□□□□ 0.53
CCHCR1-216ENST00000502557 ZNF513Q8N8E2 541 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms