RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 AP2A1O95782 977 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 ENO1P06733 434 aaKnown RBP7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 LRPAP1P30533 357 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 NOS2P35228 1153 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 IREB2P48200 963 aaKnown RBP7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 GCLCP48506 637 aaPredicted RBP7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 PSMD8P48556 350 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 PPIDQ08752 370 aaKnown RBP7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 CCNIQ14094 377 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 CCDC6Q16204 474 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 TMEM154Q6P9G4 183 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 FASTKD5Q7L8L6 764 aaKnown RBP7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 DHDDSQ86SQ9 333 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 ALDH16A1Q8IZ83 802 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 KIRREL3Q8IZU9 778 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 COLGALT1Q8NBJ5 622 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 MICAL1Q8TDZ2 1067 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 ATP2A3Q93084 1043 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 CERS2Q96G23 380 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 FAM161BQ96MY7 647 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 EBF4Q9BQW3 602 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 PPP1R12CQ9BZL4 782 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 VCX3BQ9H321 246 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 NSMCE4AQ9NXX6 385 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 SCOCQ9UIL1 159 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 GJD2Q9UKL4 321 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 GJA3Q9Y6H8 435 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 WASF2Q9Y6W5 498 aa7.41□□□□□ -1.22
LYSMD3-203ENST00000500869 ZCWPW2A0A1B0GU75 182 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 H0Y3Z8 333 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 MX2P20592 715 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 MTTPP55157 894 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 CDC16Q13042 620 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 RFTN1Q14699 578 aaPredicted RBP7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 USP41Q3LFD5 358 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 RAB41Q5JT25 222 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 FOXB2Q5VYV0 432 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 ACOT1Q86TX2 421 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 ZSCAN18Q8TBC5 510 aaPredicted RBP7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 PIP4K2CQ8TBX8 421 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 HDAC11Q96DB2 347 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 CMTM5Q96DZ9 223 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 P2RY11Q96G91 374 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 VAT1Q99536 393 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 CDH19Q9H159 772 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 NDE1Q9NXR1 346 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 RRN3Q9NYV6 651 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 DNAJC16Q9Y2G8 782 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 SMIM35A0A1B0GVV1 85 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 RNF103O00237 685 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 GABRDO14764 452 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 NEBLO76041 1014 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 ITGAXP20702 1163 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 ARL4AP40617 200 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 GRIA1P42261 906 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 COPAP53621 1224 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 ADAM17P78536 824 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 ROR2Q01974 943 aaKnown RBP7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 RCN2Q14257 317 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 HIC1Q14526 733 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 CDO1Q16878 200 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 Q3C1V9 767 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 OGFRL1Q5TC84 451 aaPredicted RBP7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 PRAMEF18Q5VWM3 479 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 CWF19L1Q69YN2 538 aaKnown RBP7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 BEND5Q7L4P6 421 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 KBTBD6Q86V97 674 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 CDR2LQ86X02 465 aaPredicted RBP7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 ANKRD13AQ8IZ07 590 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 RNF139Q8WU17 664 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 UCMAQ8WVF2 138 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 FAM167BQ9BTA0 163 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 C1QTNF1Q9BXJ1 281 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 DHX35Q9H5Z1 703 aaKnown RBP7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 LRRC40Q9H9A6 602 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 HACD3Q9P035 362 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 TRHDEQ9UKU6 1024 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 CDY2AQ9Y6F7 541 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 CDY1Q9Y6F8 540 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 NRCAMQ92823 1304 aa7.4□□□□□ -1.22
LYSMD3-203ENST00000500869 ANKRD33BA6NCL7 494 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 H3BNX3 289 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 PDLIM1O00151 329 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 PPEF2O14830 753 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 FBXO21O94952 628 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 POLBP06746 335 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 PGK2P07205 417 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 COL6A2P12110 1019 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 CYP2B6P20813 491 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 NPY2RP49146 381 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 RGS7P49802 495 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 PDE1BQ01064 536 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 NSUN2Q08J23 767 aaKnown RBP eCLIP7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 MROH9Q5TGP6 573 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 RNF111Q6ZNA4 994 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 GADL1Q6ZQY3 521 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 TICAM1Q8IUC6 712 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 SCUBE3Q8IX30 993 aa7.4□□□□□ -1.23
LYSMD3-203ENST00000500869 ZNF567Q8N184 647 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms