RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 DXOO77932 396 aaKnown RBP16.23■□□□□ 0.19
HDAC6-236ENST00000498808 LATS1O95835 1130 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 ZBED1O96006 694 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 SLFN14P0C7P3 912 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 KRT10P13645 584 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 SLC8A1P32418 973 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 TKTL1P51854 596 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 E2F1Q01094 437 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 SFSWAPQ12872 951 aaKnown RBP16.23■□□□□ 0.19
HDAC6-236ENST00000498808 SLC45A4Q5BKX6 768 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 C9orf64Q5T6V5 341 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 NAPEPLDQ6IQ20 393 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 RFWD3Q6PCD5 774 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 MFSD2AQ8NA29 543 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 TAS1R2Q8TE23 839 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 TMEM174Q8WUU8 243 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 TTC17Q96AE7 1141 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 UBXN6Q9BZV1 441 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 OLA1Q9NTK5 396 aaKnown RBP16.23■□□□□ 0.19
HDAC6-236ENST00000498808 DOCK9Q9BZ29 2069 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 TULP2O00295 520 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 IKBKBO14920 756 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 TBL1XO60907 577 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 CSKP41240 450 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 NASPP49321 788 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-236ENST00000498808 ST8SIA6P61647 398 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 GABREP78334 506 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 ARID5BQ14865 1188 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 MPP7Q5T2T1 576 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 PIK3R6Q5UE93 754 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 CDCP2Q5VXM1 449 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 IQUBQ8NA54 791 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 OR14C36Q8NHC7 312 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 KCNE4Q8WWG9 221 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 EDEM1Q92611 657 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 HEXIM2Q96MH2 286 aaKnown RBP16.22■□□□□ 0.19
HDAC6-236ENST00000498808 FAM129BQ96TA1 746 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 IMPG2Q9BZV3 1241 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
HDAC6-236ENST00000498808 GOLGA6L7A0A1B0GV03 622 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 TTC34A8MYJ7 566 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 KLK10O43240 276 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 ASLP04424 464 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 GOT1P17174 413 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 PDCP20941 246 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 SLC6A4P31645 630 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 PSMD8P48556 350 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 VAC14Q08AM6 782 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 ZNF211Q13398 564 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-236ENST00000498808 FAM133BQ5BKY9 247 aaKnown RBP16.21■□□□□ 0.19
HDAC6-236ENST00000498808 SND1Q7KZF4 910 aaKnown RBP eCLIP16.21■□□□□ 0.19
HDAC6-236ENST00000498808 MFN1Q8IWA4 741 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 LSMEM2Q8N112 164 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 SLC25A45Q8N413 288 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 SLC4A11Q8NBS3 891 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 LINC00301Q8NCQ3 95 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 KIAA0895Q8NCT3 520 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 MED8Q96G25 268 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.21■□□□□ 0.19
HDAC6-236ENST00000498808 KCTD10Q9H3F6 313 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 ASCL3Q9NQ33 180 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 ARHGAP20Q9P2F6 1191 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 TPX2Q9ULW0 747 aaKnown RBP16.21■□□□□ 0.19
HDAC6-236ENST00000498808 SSUH2Q9Y2M2 353 aa16.21■□□□□ 0.19
HDAC6-236ENST00000498808 PIEZO2Q9H5I5 2752 aa16.21■□□□□ 0.18
HDAC6-236ENST00000498808 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-236ENST00000498808 PVALEFA0A1B0GWK0 134 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 USP12O75317 370 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 NR3C1P04150 777 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 SYT1P21579 422 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 CTSOP43234 321 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-236ENST00000498808 LSSP48449 732 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 GCLMP48507 274 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 ERVPABLB-1P60509 514 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 DAB2P98082 770 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 PPP3CAQ08209 521 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 STK4Q13043 487 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 CUL4BQ13620 913 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 STK38Q15208 465 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 BSPRYQ5W0U4 402 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 ARHGAP17Q68EM7 881 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 SHC4Q6S5L8 630 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 IQCHQ86VS3 1027 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 LURAP1LQ8IV03 231 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 ANKRD52Q8NB46 1076 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 KDM1BQ8NB78 822 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 FIBINQ8TAL6 211 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 MYEOVQ96EZ4 313 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 PRICKLE1Q96MT3 831 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-236ENST00000498808 STIM2Q9P246 746 aa16.2■□□□□ 0.18
HDAC6-236ENST00000498808 ITIH6Q6UXX5 1313 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3DA0A087WVF3 549 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3IA0A087WXS9 549 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3EA0A087X179 549 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3KA0A087X1G2 549 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TARSL2A2RTX5 802 aaKnown RBP16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3FA6NER0 549 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-236ENST00000498808 YJEFN3A6XGL0 299 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3LB9A6J9 549 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms