RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.07□□□□□ -1.76
CLTC-209ENST00000498711 ZDHHC7Q9NXF8 308 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 COL20A1Q9P218 1284 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 B4GALT6Q9UBX8 382 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 ASIC3Q9UHC3 531 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 ANAPC7Q9UJX3 599 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 PNMA8BQ9ULN7 279 aaPredicted RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 ANKRD6Q9Y2G4 727 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 PTPN22Q9Y2R2 807 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 MTO1Q9Y2Z2 717 aaKnown RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 ST14Q9Y5Y6 855 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 ADGRA2Q96PE1 1338 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 DENND3A2RUS2 1198 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 SMIM23A6NLE4 172 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 YDJCA8MPS7 323 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 A8MXQ7 604 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 RASA4BC9J798 803 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 RASA4O43374 803 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 EXTL3O43909 919 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 SH3BP5O60239 455 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 SLITRK5O94991 958 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 GH2P01242 217 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 THBDP07204 575 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 MMP8P22894 467 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 AMPD1P23109 780 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 MARK3P27448 753 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 ALDH3A1P30838 453 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 YWHABP31946 246 aaKnown RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 RPA3P35244 121 aaPredicted RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 CDKN2BP42772 138 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 NPTX2P47972 431 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 GEMIN4P57678 1058 aaKnown RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 POU4F1Q01851 419 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 TAP1Q03518 808 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 TAF11Q15544 211 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 TESK1Q15569 626 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 GSTA3Q16772 222 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 USH1GQ495M9 461 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 TMEM177Q53S58 311 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 TMEM240Q5SV17 173 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 PLA2G4FQ68DD2 849 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 ANKRD34AQ69YU3 496 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 SPOCD1Q6ZMY3 1216 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 NLRP9Q7RTR0 991 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 POLNQ7Z5Q5 900 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 PRUNE1Q86TP1 453 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 NLRX1Q86UT6 975 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 GALNT15Q8N3T1 639 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 ANKRD42Q8N9B4 389 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 GDAP1Q8TB36 358 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 RAB3IL1Q8TBN0 382 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 DYDC1Q8WWB3 177 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 NSL1Q96IY1 281 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 NR1H4Q96RI1 486 aaPredicted RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 SH3GL3Q99963 347 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 SYT15Q9BQS2 421 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 ZNF518BQ9C0D4 1074 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 ACSS3Q9H6R3 686 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 MRPL47Q9HD33 250 aaKnown RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 ACP6Q9NPH0 428 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 THG1LQ9NWX6 298 aaKnown RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 PSMC3IPQ9P2W1 217 aaPredicted RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 STX18Q9P2W9 335 aaKnown RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 ZNF212Q9UDV6 495 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 CHORDC1Q9UHD1 332 aaPredicted RBP4.07□□□□□ -1.76
CLTC-209ENST00000498711 KCNG1Q9UIX4 513 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 COQ6Q9Y2Z9 468 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 PCDHAC2Q9Y5I4 1007 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 SCINQ9Y6U3 715 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 PARP14Q460N5 1801 aa4.07□□□□□ -1.76
CLTC-209ENST00000498711 CNTNAP2Q9UHC6 1331 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 A0A1W2PPM1 405 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 WDR64B1ANS9 1081 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 H0Y8X5 98 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 CCDC22O60826 627 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 NEBLO76041 1014 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 LSM8O95777 96 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 MT-CO1P00395 513 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 GSTA2P09210 222 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 DLDP09622 509 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 PF4V1P10720 104 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 RARBP10826 455 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 PECAM1P16284 738 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 SP100P23497 879 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 VHLP40337 213 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 RECQLP46063 649 aaPredicted RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 PTDSS1P48651 473 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 ARSEP51690 589 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 RAC1P63000 192 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 CDK16Q00536 496 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 SNX1Q13596 522 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 TNFAIP1Q13829 316 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 UGCGQ16739 394 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 KHDC1Q4VXA5 237 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 STXBP5Q5T5C0 1151 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 LIN9Q5TKA1 542 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 ZNF787Q6DD87 383 aa4.06□□□□□ -1.76
CLTC-209ENST00000498711 KYAT3Q6YP21 454 aaKnown RBP4.06□□□□□ -1.76
CLTC-209ENST00000498711 CYS1Q717R9 158 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms