RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 CAVIN3Q969G5 261 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 CELF6Q96J87 481 aaKnown RBP7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 RPRD1AQ96P16 312 aaPredicted RBP7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 QKIQ96PU8 341 aaKnown RBP eCLIP7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 CYP2S1Q96SQ9 504 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 FMO2Q99518 471 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 LGMNQ99538 433 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 GDF15Q99988 308 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 DDX50Q9BQ39 737 aaKnown RBP7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 KLF16Q9BXK1 252 aaPredicted RBP7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 FAM129AQ9BZQ8 928 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 ZYG11BQ9C0D3 744 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 BRD8Q9H0E9 1235 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 RNF38Q9H0F5 515 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 NEUROG2Q9H2A3 272 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 TLE6Q9H808 572 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 IL21Q9HBE4 155 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 USP29Q9HBJ7 922 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 GKN1Q9NS71 199 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 ZDHHC18Q9NUE0 388 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 ZNF446Q9NWS9 450 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 SMPD4Q9NXE4 827 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 DONSONQ9NYP3 566 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 GRHL1Q9NZI5 618 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 MPP6Q9NZW5 540 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 FAM153AQ9UHL3 310 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 TPX2Q9ULW0 747 aaKnown RBP7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 NEU2Q9Y3R4 380 aa7.32□□□□□ -1.24
GPATCH4-209ENST00000498641 CLUHO75153 1309 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 TRAV19A0A0A6YYK7 116 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 A0A1W2PRU2 124 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 DNALI1O14645 258 aaPredicted RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 ATP8B1O43520 1251 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 ACSL4O60488 711 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 GCATO75600 419 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 STC2O76061 302 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 CKMP06732 381 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 HNRNPA1P09651 372 aaKnown RBP eCLIP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 RHOQP17081 205 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 GJA1P17302 382 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 IVDP26440 423 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 ECHS1P30084 290 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 CORO1AP31146 461 aaKnown RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 BASP1P80723 227 aaKnown RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 SMAD3P84022 425 aaKnown RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 DHX9Q08211 1270 aaKnown RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 CASP8Q14790 479 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 PRKD1Q15139 912 aaPredicted RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 ARHGAP15Q53QZ3 475 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 ZNF697Q5TEC3 545 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 MANEALQ5VSG8 457 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 FBXL22Q6P050 247 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 ZDHHC24Q6UX98 284 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 C4orf22Q6V702 233 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 ARHGEF18Q6ZSZ5 1173 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 GAREM2Q75VX8 874 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 MTERF4Q7Z6M4 381 aaKnown RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 TFAP2DQ7Z6R9 452 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 TMC8Q8IU68 726 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 PPIL6Q8IXY8 311 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 NPWQ8N729 165 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 RTL3Q8N8U3 475 aaKnown RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 FBXO25Q8TCJ0 367 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 OLFM3Q96PB7 478 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 FUT8Q9BYC5 575 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 TSPYL1Q9H0U9 437 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 LMAN2LQ9H0V9 348 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 ACBD3Q9H3P7 528 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 PRDM12Q9H4Q4 367 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 PIDD1Q9HB75 910 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 HCFC1R1Q9NWW0 138 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 PAK5Q9P286 719 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 PPARGC1AQ9UBK2 798 aaKnown RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 LSM7Q9UK45 103 aaKnown RBP7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 PTPRSQ13332 1948 aa7.31□□□□□ -1.24
GPATCH4-209ENST00000498641 PATJQ8NI35 1801 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 CCDC195A0A1B0GUA6 201 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 C5orf60A6NFR6 353 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 DRGXA6NNA5 263 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 E7EVH7 732 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 RNF103O00237 685 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 TRDMT1O14717 391 aaKnown RBP7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 MTSS1O43312 755 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 TSPAN3O60637 253 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 NEBLO76041 1014 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 CNTN5O94779 1100 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 RHOP08100 348 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 HOXC13P31276 330 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 GARSP41250 739 aaKnown RBP7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 NRIP1P48552 1158 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 LMAN1P49257 510 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 NRLP54845 237 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 FAM193AP78312 1265 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 GALNT2Q10471 571 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 SLMAPQ14BN4 828 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 MORF4L2Q15014 288 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 RABGAP1LQ5R372 815 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 ADGRF1Q5T601 910 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 CFAP58Q5T655 872 aa7.3□□□□□ -1.24
GPATCH4-209ENST00000498641 GPR158Q5T848 1215 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms