RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 CST6Q15828 149 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 HNRNPA1L2Q32P51 320 aaKnown RBP15.27■□□□□ 0.04
TRAF4-212ENST00000498540 SGO2Q562F6 1265 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 MPP7Q5T2T1 576 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 C6orf118Q5T5N4 469 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 HES3Q5TGS1 186 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 ATL3Q6DD88 541 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 NADSYN1Q6IA69 706 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 MSANTD2Q6P1R3 559 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 MFN1Q8IWA4 741 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 GUF1Q8N442 669 aaKnown RBP15.27■□□□□ 0.04
TRAF4-212ENST00000498540 EID2Q8N6I1 236 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 SLC39A7Q92504 469 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 TTC17Q96AE7 1141 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 MYEOVQ96EZ4 313 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 MRGPRX3Q96LB0 322 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 NEUROG2Q9H2A3 272 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 PRORYQ9H606 182 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 AASDHPPTQ9NRN7 309 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 HESX1Q9UBX0 185 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 USP25Q9UHP3 1055 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 CFAP45Q9UL16 551 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 HPSEQ9Y251 543 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 RAI2Q9Y5P3 530 aa15.27■□□□□ 0.04
TRAF4-212ENST00000498540 A0A1W2PR77 199 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 PIK3R2O00459 728 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 RNASEH2AO75792 299 aaKnown RBP15.26■□□□□ 0.03
TRAF4-212ENST00000498540 GABBR2O75899 941 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 LCP1P13796 627 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 CD19P15391 556 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 CD38P28907 300 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 EPHA8P29322 1005 aaPredicted RBP15.26■□□□□ 0.03
TRAF4-212ENST00000498540 ST8SIA6P61647 398 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 C19orf57Q0VDD7 668 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 TARDBPQ13148 414 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRAF4-212ENST00000498540 CBWD6Q4V339 395 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 CBWD3Q5JTY5 395 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 CBWD5Q5RIA9 395 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 C9orf64Q5T6V5 341 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 MMAAQ8IVH4 418 aaKnown RBP15.26■□□□□ 0.03
TRAF4-212ENST00000498540 OR2T34Q8NGX1 318 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 FIBINQ8TAL6 211 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 KCTD13Q8WZ19 329 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 CNGB3Q9NQW8 809 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 AK5Q9Y6K8 562 aa15.26■□□□□ 0.03
TRAF4-212ENST00000498540 LRRC72A6NJI9 287 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 O00370 1275 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 ATXN7O15265 892 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-212ENST00000498540 IRAK2O43187 625 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 ACSL4O60488 711 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 RNASEH1O60930 286 aaKnown RBP15.25■□□□□ 0.03
TRAF4-212ENST00000498540 C1SP09871 688 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 CMA1P23946 247 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 CTSOP43234 321 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-212ENST00000498540 SLC11A2P49281 568 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 RGS7P49802 495 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 RPS24P62847 133 aaKnown RBP15.25■□□□□ 0.03
TRAF4-212ENST00000498540 DPYDQ12882 1025 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 CUL2Q13617 745 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 PKDCCQ504Y2 493 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 NUGGCQ68CJ6 796 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 FBXL19Q6PCT2 694 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 MMS22LQ6ZRQ5 1243 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 SCML4Q8N228 414 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 AADATQ8N5Z0 425 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 HJURPQ8NCD3 748 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-212ENST00000498540 CLEC4CQ8WTT0 213 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 TSC1Q92574 1164 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 SKA1Q96BD8 255 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 OMDQ99983 421 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 GDF3Q9NR23 364 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 ADAMTS1Q9UHI8 967 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 FZD4Q9ULV1 537 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 CFAP46Q8IYW2 2715 aa15.25■□□□□ 0.03
TRAF4-212ENST00000498540 ARID1BQ8NFD5 2236 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-212ENST00000498540 TTC34A8MYJ7 566 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 TK2O00142 265 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 ASLP04424 464 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 SETSIPP0DME0 302 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 SLC8A1P32418 973 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 PSMD8P48556 350 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 CCR5P51681 352 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 ADPRHP54922 357 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 TBX4P57082 545 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 NXPH1P58417 271 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 PPP2CBP62714 309 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 PPP2CAP67775 309 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 BNIP3Q12983 259 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 ARID5BQ14865 1188 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 RTP5Q14D33 572 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 EDRF1Q3B7T1 1238 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 FSCBQ5H9T9 825 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 PITRM1Q5JRX3 1037 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 LRRC69Q6ZNQ3 347 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 UNC45BQ8IWX7 931 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 SMYD4Q8IYR2 804 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-212ENST00000498540 CARNMT1Q8N4J0 409 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 UBR7Q8N806 425 aa15.24■□□□□ 0.03
TRAF4-212ENST00000498540 ZNF557Q8N988 423 aaPredicted RBP15.24■□□□□ 0.03
TRAF4-212ENST00000498540 TFAP2BQ92481 460 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms