RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, human

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC8-208	ENST00000497892	PRRT4	C9JH25	899 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892		F5H5T6	163 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892		I6L893	689 aa	Predicted RBP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	TBL1X	O60907	577 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	MFAP3L	O75121	409 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	PAGE1	O75459	146 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	ENDOD1	O94919	500 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	PLEK	P08567	350 aa	Predicted RBP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	PDGFRA	P16234	1089 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	TACR2	P21452	398 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	HLA-F	P30511	346 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	HOXA6	P31267	233 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	RPS24	P62847	133 aa	Known RBP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	EIF4H	Q15056	248 aa	Known RBP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	GEN1	Q17RS7	908 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	CCDC14	Q49A88	953 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	TTC39B	Q5VTQ0	682 aa	Predicted RBP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	STRADA	Q7RTN6	431 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	ANKS1B	Q7Z6G8	1248 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	VPS36	Q86VN1	386 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	CHSY1	Q86X52	802 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	GAS2L3	Q86XJ1	694 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	ALLC	Q8N6M5	410 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	ZNF557	Q8N988	423 aa	Predicted RBP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	IL17RC	Q8NAC3	791 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	ATOH1	Q92858	354 aa	Predicted RBP	11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	MCEE	Q96PE7	176 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	SELENOO	Q9BVL4	669 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	TKTL2	Q9H0I9	626 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	ANLN	Q9NQW6	1124 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	FAM86C1	Q9NVL1	165 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	ARHGAP20	Q9P2F6	1191 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	HCN2	Q9UL51	889 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	MMP17	Q9ULZ9	603 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	PIEZO1	Q92508	2521 aa		11.63	□□□□□ -0.55
ERCC8-208	ENST00000497892	ANKRD62	A6NC57	917 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	RTN2	O75298	545 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	ADCY5	O95622	1261 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	FTL	P02792	175 aa	Predicted RBP	11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	GPD1	P21695	349 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	NBL1	P41271	181 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	ATXN1	P54253	815 aa	Known RBP	11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	ATP11A	P98196	1134 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	AUH	Q13825	339 aa	Known RBP	11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	DMC1	Q14565	340 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	EMC10	Q5UCC4	262 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	EGFLAM	Q63HQ2	1017 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	PLEKHA7	Q6IQ23	1121 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	WDR59	Q6PJI9	974 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	ZC3H14	Q6PJT7	736 aa	Known RBP	11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	TRMT11	Q7Z4G4	463 aa	Known RBP	11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	MFN1	Q8IWA4	741 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	DRC7	Q8IY82	874 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	LGI2	Q8N0V4	545 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	CFAP52	Q8N1V2	620 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	FAM160A2	Q8N612	972 aa	Predicted RBP	11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	ZBTB44	Q8NCP5	570 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	WFDC5	Q8TCV5	224 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	CENPI	Q92674	756 aa	Predicted RBP	11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	TRIM5	Q9C035	493 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	ISCU	Q9H1K1	167 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	WDCP	Q9H6R7	721 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	ZDHHC4	Q9NPG8	344 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	ABHD10	Q9NUJ1	306 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	PARVA	Q9NVD7	372 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	ADAMTS1	Q9UHI8	967 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	SLC8A2	Q9UPR5	921 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	PCDHGA2	Q9Y5H1	932 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	HS3ST4	Q9Y661	456 aa		11.62	□□□□□ -0.55
ERCC8-208	ENST00000497892	EML5	Q05BV3	1969 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	DOCK4	Q8N1I0	1966 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	CKAP5	Q14008	2032 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892		A0A087X0T9	212 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892		A0A1B0GVM2	712 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	TCAF2	A6NFQ2	919 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	SGK1	O00141	431 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	ADAM23	O75077	832 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	LUC7L3	O95232	432 aa	Known RBP	11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	KLF8	O95600	359 aa	Predicted RBP	11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	TPM1	P09493	284 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	FAM228B	P0C875	321 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	MYBL1	P10243	752 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	HOXC13	P31276	330 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	PLA2G5	P39877	138 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	ZNF143	P52747	638 aa	Predicted RBP	11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	NRL	P54845	237 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	HDAC4	P56524	1084 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	RPL7A	P62424	266 aa	Known RBP	11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	DMWD	Q09019	674 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	TBX2	Q13207	712 aa	Predicted RBP	11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	MAMLD1	Q13495	774 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	CDH18	Q13634	790 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	CRY1	Q16526	586 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	CDO1	Q16878	200 aa		11.61	□□□□□ -0.55
ERCC8-208	ENST00000497892	EOGT	Q5NDL2	527 aa		11.61	□□□□□ -0.55

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