RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 C2CD4DB7Z1M9 353 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 E7EVH7 732 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 M0QYT0 321 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 GCATO75600 419 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 BRCC3P46736 316 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 GLUD2P49448 558 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 MAGOHP61326 146 aaKnown RBP16.78■□□□□ 0.28
CBX4-204ENST00000495122 GNGT1P63211 74 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 SIGLEC14Q08ET2 396 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 SMARCB1Q12824 385 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 ELAVL2Q12926 359 aaKnown RBP16.78■□□□□ 0.28
CBX4-204ENST00000495122 AUHQ13825 339 aaKnown RBP16.78■□□□□ 0.28
CBX4-204ENST00000495122 KYNUQ16719 465 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 CA9Q16790 459 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 PPP6R3Q5H9R7 873 aaPredicted RBP16.78■□□□□ 0.28
CBX4-204ENST00000495122 OTUD1Q5VV17 481 aaPredicted RBP16.78■□□□□ 0.28
CBX4-204ENST00000495122 TAS1R1Q7RTX1 841 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 SPATA2LQ8IUW3 424 aaPredicted RBP16.78■□□□□ 0.28
CBX4-204ENST00000495122 UNC45BQ8IWX7 931 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 FAM71DQ8N9W8 422 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 ATP11CQ8NB49 1132 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 GLIS1Q8NBF1 620 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 PAAF1Q9BRP4 392 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 KLC2Q9H0B6 622 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 USP29Q9HBJ7 922 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 SAYSD1Q9NPB0 183 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 GPATCH2LQ9NWQ4 482 aa16.78■□□□□ 0.28
CBX4-204ENST00000495122 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
CBX4-204ENST00000495122 TIMM13Q9Y5L4 95 aaPredicted RBP16.78■□□□□ 0.28
CBX4-204ENST00000495122 C5orf60A6NFR6 353 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 OR6C75A6NL08 312 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 C2CD2LO14523 706 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 NCAM2O15394 837 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 STK10O94804 968 aaKnown RBP16.77■□□□□ 0.28
CBX4-204ENST00000495122 ACSL3O95573 720 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 GSTA2P09210 222 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 ZSCAN5DPP0CG00 497 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 MAGEA11P43364 429 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 MMP13P45452 471 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 GDF10P55107 478 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 PAFAH1B3Q15102 231 aaKnown RBP16.77■□□□□ 0.28
CBX4-204ENST00000495122 RAB6CQ53S08 254 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 VSTM1Q6UX27 236 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 CCDC185Q8N715 623 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 RNF139Q8WU17 664 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 LRRC39Q96DD0 335 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 ASIC4Q96FT7 647 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 OLFM3Q96PB7 478 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 ZCWPW1Q9H0M4 648 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 RAB6CQ9H0N0 254 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 SENP1Q9P0U3 644 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 SAE1Q9UBE0 346 aaPredicted RBP16.77■□□□□ 0.28
CBX4-204ENST00000495122 SLC24A2Q9UI40 661 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 FBXW11Q9UKB1 542 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 SSX2IPQ9Y2D8 614 aa16.77■□□□□ 0.28
CBX4-204ENST00000495122 PPP1R12AO14974 1030 aaPredicted RBP16.76■□□□□ 0.27
CBX4-204ENST00000495122 TRIM66O15016 1216 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 TEX28O15482 410 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 ETS1P14921 441 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 TFE3P19532 575 aaPredicted RBP16.76■□□□□ 0.27
CBX4-204ENST00000495122 TPSB2P20231 275 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 ADRA1BP35368 520 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 CXCR3P49682 368 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 CDK16Q00536 496 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 DSG1Q02413 1049 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 KCNJ11Q14654 390 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 PDK1Q15118 436 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 TPSAB1Q15661 275 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 ATAT1Q5SQI0 421 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 FUT10Q6P4F1 479 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 C1orf228Q6PIY5 440 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 TMC5Q6UXY8 1006 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 BHLHA9Q7RTU4 235 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 GPR149Q86SP6 731 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 FAM131BQ86XD5 332 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 ARHGAP18Q8N392 663 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 TDRD5Q8NAT2 981 aaKnown RBP16.76■□□□□ 0.27
CBX4-204ENST00000495122 MCUQ8NE86 351 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 C8orf48Q96LL4 319 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 COLEC11Q9BWP8 271 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 ADAM33Q9BZ11 813 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 RXFP1Q9HBX9 757 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 ARHGEF4Q9NR80 690 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 ABCC13Q9NSE7 274 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 COMMD8Q9NX08 183 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 CACNG4Q9UBN1 327 aa16.76■□□□□ 0.27
CBX4-204ENST00000495122 YJEFN3A6XGL0 299 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 E7ENQ6 273 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 KCNN4O15554 427 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 MTSS1O43312 755 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 FYNP06241 537 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 ADH1AP07327 375 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 IGFBP6P24592 240 aaPredicted RBP16.75■□□□□ 0.27
CBX4-204ENST00000495122 HPDP32754 393 aaPredicted RBP16.75■□□□□ 0.27
CBX4-204ENST00000495122 FDFT1P37268 417 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 SEMA3BQ13214 749 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 DPYSQ14117 519 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 KLHL38Q2WGJ6 581 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 BRMS1LQ5PSV4 323 aa16.75■□□□□ 0.27
CBX4-204ENST00000495122 NCBP2-AS2Q69YL0 99 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms