RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 GPD1P21695 349 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 SDC4P31431 198 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 RDXP35241 583 aaKnown RBP17.7■□□□□ 0.42
SNX17-209ENST00000494893 WASP42768 502 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 HDAC4P56524 1084 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 MAMLD1Q13495 774 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 CDO1Q16878 200 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 C5orf22Q49AR2 442 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 HEATR6Q6AI08 1181 aaKnown RBP17.7■□□□□ 0.42
SNX17-209ENST00000494893 ADIPOR2Q86V24 386 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 TMTC1Q8IUR5 882 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 CCDC26Q8TAB7 109 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 KCNV2Q8TDN2 545 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 SORCS1Q8WY21 1168 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 MCEEQ96PE7 176 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 MAGEB5Q9BZ81 275 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 SLC12A6Q9UHW9 1150 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 INTS6Q9UL03 887 aaKnown RBP17.7■□□□□ 0.42
SNX17-209ENST00000494893 SLC8A2Q9UPR5 921 aa17.7■□□□□ 0.42
SNX17-209ENST00000494893 BZW2Q9Y6E2 419 aaKnown RBP17.7■□□□□ 0.42
SNX17-209ENST00000494893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNX17-209ENST00000494893 WASH3PC4AMC7 463 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 PROB1E7EW31 1015 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 F5H5T6 163 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 CCP110O43303 1012 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 LUC7L3O95232 432 aaKnown RBP17.69■□□□□ 0.42
SNX17-209ENST00000494893 LMAN2Q12907 356 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 CRY1Q16526 586 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 HSF5Q4G112 596 aaPredicted RBP17.69■□□□□ 0.42
SNX17-209ENST00000494893 STRADAQ7RTN6 431 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 MFN1Q8IWA4 741 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 FIBINQ8TAL6 211 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 FAM172AQ8WUF8 416 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 FAM126AQ9BYI3 521 aaPredicted RBP17.69■□□□□ 0.42
SNX17-209ENST00000494893 TRIM7Q9C029 511 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 SIK2Q9H0K1 926 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 ELOVL2Q9NXB9 296 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 CACNA2D2Q9NY47 1150 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 GGA2Q9UJY4 613 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 VANGL2Q9ULK5 521 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 PCDHGA2Q9Y5H1 932 aa17.69■□□□□ 0.42
SNX17-209ENST00000494893 A0A1W2PQF6 199 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 PABPC1P11940 636 aaKnown RBP17.68■□□□□ 0.42
SNX17-209ENST00000494893 NTSR1P30989 418 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 EIF4A3P38919 411 aaKnown RBP17.68■□□□□ 0.42
SNX17-209ENST00000494893 ZNF143P52747 638 aaPredicted RBP17.68■□□□□ 0.42
SNX17-209ENST00000494893 ZNF252P-AS1Q0IIN9 211 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 SRSF5Q13243 272 aaKnown RBP17.68■□□□□ 0.42
SNX17-209ENST00000494893 ENPP2Q13822 863 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 ASTE1Q2TB18 679 aaPredicted RBP17.68■□□□□ 0.42
SNX17-209ENST00000494893 FUT11Q495W5 492 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 PPP1R2P3Q6NXS1 205 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 SND1Q7KZF4 910 aaKnown RBP eCLIP17.68■□□□□ 0.42
SNX17-209ENST00000494893 CHST9Q7L1S5 443 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 WDR5BQ86VZ2 330 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 FANCMQ8IYD8 2048 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 CCAR2Q8N163 923 aaKnown RBP17.68■□□□□ 0.42
SNX17-209ENST00000494893 CARNMT1Q8N4J0 409 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 CAMKK1Q8N5S9 505 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 CCDC185Q8N715 623 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 OR52K2Q8NGK3 314 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 FAM122AQ96E09 287 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 CHP1Q99653 195 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 GABRG3Q99928 467 aa17.68■□□□□ 0.42
SNX17-209ENST00000494893 THAP10Q9P2Z0 257 aaPredicted RBP17.68■□□□□ 0.42
SNX17-209ENST00000494893 MUC22E2RYF6 1773 aaPredicted RBP17.68■□□□□ 0.42
SNX17-209ENST00000494893 TMEM191CA6NGB0 347 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 ARHGAP6O43182 974 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 HRO43593 1189 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 CNTN5O94779 1100 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 IL12RB1P42701 662 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 ZNF234Q14588 700 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 EIF4HQ15056 248 aaKnown RBP17.67■□□□□ 0.42
SNX17-209ENST00000494893 PTPRNQ16849 979 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 ALFQ53S48 1182 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 EOGTQ5NDL2 527 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 CXorf57Q6NSI4 855 aaKnown RBP17.67■□□□□ 0.42
SNX17-209ENST00000494893 KIAA1211LQ6NV74 962 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 NUDT18Q6ZVK8 323 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 LONP2Q86WA8 852 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 ARFGAP1Q8N6T3 406 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 WFIKKN2Q8TEU8 576 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 ZNF653Q96CK0 615 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 C1orf74Q96LT6 269 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 RPRD1AQ96P16 312 aaPredicted RBP17.67■□□□□ 0.42
SNX17-209ENST00000494893 HAPLN3Q96S86 360 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNX17-209ENST00000494893 PARVAQ9NVD7 372 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 CNOT8Q9UFF9 292 aaKnown RBP17.67■□□□□ 0.42
SNX17-209ENST00000494893 RAD54BQ9Y620 910 aa17.67■□□□□ 0.42
SNX17-209ENST00000494893 IGLV3-10A0A075B6K4 115 aa17.66■□□□□ 0.42
SNX17-209ENST00000494893 A0A1B0GVM2 712 aa17.66■□□□□ 0.42
SNX17-209ENST00000494893 TCAF2A6NFQ2 919 aa17.66■□□□□ 0.42
SNX17-209ENST00000494893 DRGXA6NNA5 263 aa17.66■□□□□ 0.42
SNX17-209ENST00000494893 FAM72CH0Y354 149 aa17.66■□□□□ 0.42
SNX17-209ENST00000494893 APBB3O95704 486 aa17.66■□□□□ 0.42
SNX17-209ENST00000494893 ADRA1BP35368 520 aa17.66■□□□□ 0.42
SNX17-209ENST00000494893 NRLP54845 237 aa17.66■□□□□ 0.42
SNX17-209ENST00000494893 MTA1Q13330 715 aa17.66■□□□□ 0.42
SNX17-209ENST00000494893 RABGAP1LQ5R372 815 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms