RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 A0A1W2PQ09 198 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CCDC162PA2VCL2 907 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 C5orf51A6NDU8 294 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 WDR64B1ANS9 1081 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 B4E1Z4 1266 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 KIF28PB7ZC32 967 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PCDH17O14917 1159 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 EREGO14944 169 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 IDH3BO43837 385 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PAGE1O75459 146 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ZNF821O75541 412 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CDC123O75794 336 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 AKR7A3O95154 331 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 IL18RAPO95256 599 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ATE1O95260 518 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ITGB3P05106 788 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CYP2E1P05181 493 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 RPLP1P05386 114 aaKnown RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CLEC3BP05452 202 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 FESP07332 822 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 EDN3P14138 238 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CPA1P15085 419 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 AHCYP23526 432 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PTPN4P29074 926 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 HOXC8P31273 242 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 GARSP41250 739 aaKnown RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 SLC11A1P49279 550 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PRKAA2P54646 552 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 RAB15P59190 212 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 RNF4P78317 190 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CYP4F2P78329 520 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 XIAPP98170 497 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ENPEPQ07075 957 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 LGALS3BPQ08380 585 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CYP4F3Q08477 520 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 GALNT2Q10471 571 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ITGB3BPQ13352 177 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TNFAIP1Q13829 316 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CCINQ13939 588 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TOB2Q14106 344 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 SPIDRQ14159 915 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 SLC39A14Q15043 492 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PON2Q15165 354 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 RGS21Q2M5E4 152 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PCGF3Q3KNV8 242 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PRAMEF14Q5SWL7 426 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 DEPDC1Q5TB30 811 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CWF19L1Q69YN2 538 aaKnown RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 NCAPH2Q6IBW4 605 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 METTL2BQ6P1Q9 378 aaKnown RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CNKSR3Q6P9H4 555 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 USP17L6PQ6QN14 398 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TMEM270Q6UE05 265 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ZNF813Q6ZN06 617 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 FAM83HQ6ZRV2 1179 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 LINC00696Q6ZRV3 163 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CCDC121Q6ZUS5 278 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 BBS12Q6ZW61 710 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CHSY3Q70JA7 882 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 HTR3DQ70Z44 454 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 KRT27Q7Z3Y8 459 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 VASH2Q86V25 355 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 KRTAP1-3Q8IUG1 177 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ARMC8Q8IUR7 673 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 MAP7D3Q8IWC1 876 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 DDIASQ8IXT1 998 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TXLNBQ8N3L3 684 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CCNYL1Q8N7R7 359 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 EIF1ADQ8N9N8 165 aaKnown RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ZNF680Q8NEM1 530 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 SPATA4Q8NEY3 305 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 OR8K5Q8NH50 307 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 LRRC8CQ8TDW0 803 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CELF1Q92879 486 aaKnown RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 GPKOWQ92917 476 aaPredicted RBP eCLIP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PTERQ96BW5 349 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PGM2Q96G03 612 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ERO1AQ96HE7 468 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 MED30Q96HR3 178 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 FAM71F1Q96KD3 344 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 GDAP1L1Q96MZ0 367 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TWNKQ96RR1 684 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 MIPEPQ99797 713 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TEX12Q9BXU0 123 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 KLHL4Q9C0H6 718 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PHAXQ9H814 394 aaKnown RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 EPB41L5Q9HCM4 733 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 SAYSD1Q9NPB0 183 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TMPRSS4Q9NRS4 437 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 CENPMQ9NSP4 180 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TBC1D23Q9NUY8 699 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PPP4R2Q9NY27 417 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TAS2R7Q9NYW3 318 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 IGSF9Q9P2J2 1179 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 AFF4Q9UHB7 1163 aaKnown RBP4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ASIC3Q9UHC3 531 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 TBX20Q9UMR3 447 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 SLC22A14Q9Y267 594 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 ZBTB1Q9Y2K1 713 aa4.35□□□□□ -1.71
BRCA1-220ENST00000492859 PPIL1Q9Y3C6 166 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms