RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-215	ENST00000492772	HJURP	Q8NCD3	748 aa	Predicted RBP	11.44	□□□□□ -0.58
SND1-215	ENST00000492772	WFDC5	Q8TCV5	224 aa		11.44	□□□□□ -0.58
SND1-215	ENST00000492772	EDEM1	Q92611	657 aa		11.44	□□□□□ -0.58
SND1-215	ENST00000492772	TTC17	Q96AE7	1141 aa		11.44	□□□□□ -0.58
SND1-215	ENST00000492772	CNGB3	Q9NQW8	809 aa		11.44	□□□□□ -0.58
SND1-215	ENST00000492772	TSPAN16	Q9UKR8	245 aa		11.44	□□□□□ -0.58
SND1-215	ENST00000492772	MYLK	Q15746	1914 aa		11.44	□□□□□ -0.58
SND1-215	ENST00000492772	TEX51	A0A1B0GUA7	166 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772		A0A1W2PP55	124 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	YJEFN3	A6XGL0	299 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772		E7ENQ6	273 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	TULP2	O00295	520 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	CAPN9	O14815	690 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	MID1	O15344	667 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	SIN3B	O75182	1162 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	RNASEH2A	O75792	299 aa	Known RBP	11.43	□□□□□ -0.58
SND1-215	ENST00000492772	ZIC2	O95409	532 aa	Predicted RBP	11.43	□□□□□ -0.58
SND1-215	ENST00000492772	ADH1B	P00325	375 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	IGLV3-27	P01718	113 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	WNT1	P04628	370 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	MCCD1	P59942	119 aa	Predicted RBP	11.43	□□□□□ -0.58
SND1-215	ENST00000492772	YWHAE	P62258	255 aa	Known RBP	11.43	□□□□□ -0.58
SND1-215	ENST00000492772	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
SND1-215	ENST00000492772	SHB	Q15464	509 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	FAM133B	Q5BKY9	247 aa	Known RBP	11.43	□□□□□ -0.58
SND1-215	ENST00000492772	PIK3R6	Q5UE93	754 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	RFWD3	Q6PCD5	774 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	FBXL19	Q6PCT2	694 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.43	□□□□□ -0.58
SND1-215	ENST00000492772	EID2	Q8N6I1	236 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	FIBIN	Q8TAL6	211 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	KCTD13	Q8WZ19	329 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	TSC1	Q92574	1164 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	NDRG1	Q92597	394 aa	Known RBP	11.43	□□□□□ -0.58
SND1-215	ENST00000492772	SEMA4D	Q92854	862 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	TATDN2	Q93075	761 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	MYO19	Q96H55	970 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	OMD	Q99983	421 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	DDX50	Q9BQ39	737 aa	Known RBP	11.43	□□□□□ -0.58
SND1-215	ENST00000492772	RAB20	Q9NX57	234 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	SERGEF	Q9UGK8	458 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	CFAP45	Q9UL16	551 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	PTPRQ	Q9UMZ3	2332 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	TENM4	Q6N022	2769 aa		11.43	□□□□□ -0.58
SND1-215	ENST00000492772	ITIH6	Q6UXX5	1313 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	EDDM13	A0A1B0GTR0	161 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772		A0A1W2PR77	199 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	TARSL2	A2RTX5	802 aa	Known RBP	11.42	□□□□□ -0.58
SND1-215	ENST00000492772	CAPN8	A6NHC0	703 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	C10orf142	B7Z368	130 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	CBX4	O00257	560 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	ACSL4	O60488	711 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	RHOBTB3	O94955	611 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	F13A1	P00488	732 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	SRPRA	P08240	638 aa	Known RBP	11.42	□□□□□ -0.58
SND1-215	ENST00000492772	ZSCAN22	P10073	491 aa	Predicted RBP	11.42	□□□□□ -0.58
SND1-215	ENST00000492772	CD19	P15391	556 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	PFKFB1	P16118	471 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	SLC6A4	P31645	630 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	ACTN2	P35609	894 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	CSK	P41240	450 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	CLDN6	P56747	220 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	NXPH1	P58417	271 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	DAOA	P59103	153 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	ADAM9	Q13443	819 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	CDH18	Q13634	790 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.42	□□□□□ -0.58
SND1-215	ENST00000492772	PRAMEF14	Q5SWL7	426 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	SFMBT2	Q5VUG0	894 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.42	□□□□□ -0.58
SND1-215	ENST00000492772	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.42	□□□□□ -0.58
SND1-215	ENST00000492772	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.42	□□□□□ -0.58	7e-12	■□□□□ 8.8
SND1-215	ENST00000492772	DHX40	Q8IX18	779 aa	Known RBP	11.42	□□□□□ -0.58
SND1-215	ENST00000492772	CACTIN-AS1	Q8N1I8	211 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	GUF1	Q8N442	669 aa	Known RBP	11.42	□□□□□ -0.58
SND1-215	ENST00000492772	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.42	□□□□□ -0.58
SND1-215	ENST00000492772	IRGQ	Q8WZA9	623 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	AZIN2	Q96A70	460 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	SERAC1	Q96JX3	654 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	LMLN	Q96KR4	655 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	MRGPRX3	Q96LB0	322 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	NEUROG2	Q9H2A3	272 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	MTG2	Q9H4K7	406 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	ERVMER34-1	Q9H9K5	563 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	EBF2	Q9HAK2	575 aa		11.42	□□□□□ -0.58
SND1-215	ENST00000492772	ASXL3	Q9C0F0	2248 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	TLR4	O00206	839 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	MAGEC1	O60732	1142 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	MOCS3	O95396	460 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	EPB41	P11171	864 aa	Known RBP	11.41	□□□□□ -0.58
SND1-215	ENST00000492772	PLA2G2A	P14555	144 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	GOT1	P17174	413 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	CKMT2	P17540	419 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	C5AR1	P21730	350 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	SLC8A1	P32418	973 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	NUDT1	P36639	197 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	RXRG	P48443	463 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	PSMD8	P48556	350 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	ADPRH	P54922	357 aa		11.41	□□□□□ -0.58
SND1-215	ENST00000492772	TBX4	P57082	545 aa		11.41	□□□□□ -0.58

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