RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 BIN1O00499 593 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 THAP12O43422 761 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 GJB3O75712 270 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 SEMA4FO95754 770 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 TOP3BO95985 862 aaKnown RBP9.07□□□□□ -0.96
NUP50-217ENST00000491860 ABCB4P21439 1286 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 BMP6P22004 513 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 CCR1P32246 355 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 GRIA4P48058 902 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 STX17P56962 302 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 BPIFB4P59827 614 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 SIM1P81133 766 aaPredicted RBP9.07□□□□□ -0.96
NUP50-217ENST00000491860 CDK17Q00537 523 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 PTK2Q05397 1052 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 GRIK2Q13002 908 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 PTPRNQ16849 979 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 EXOC3L4Q17RC7 722 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 INAVAQ3KP66 663 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 MS4A13Q5J8X5 152 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 EFHC1Q5JVL4 640 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 RABGAP1LQ5R372 815 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 TMEM215Q68D42 235 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 TRIM65Q6PJ69 517 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 GLRX5Q86SX6 157 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 ZDHHC17Q8IUH5 632 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 ARHGEF19Q8IW93 802 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 SCUBE3Q8IX30 993 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 ZCCHC9Q8N567 271 aaKnown RBP9.07□□□□□ -0.96
NUP50-217ENST00000491860 ZNF606Q8WXB4 792 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 P2RY11Q96G91 374 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 SLC39A13Q96H72 371 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 KREMEN1Q96MU8 473 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 CDC6Q99741 560 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 SLC4A5Q9BY07 1137 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 MIR1-1HGQ9H1L0 117 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 RSPH9Q9H1X1 276 aaPredicted RBP9.07□□□□□ -0.96
NUP50-217ENST00000491860 PRSS16Q9NQE7 514 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 RRN3Q9NYV6 651 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 APEX2Q9UBZ4 518 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 CLEC4EQ9ULY5 219 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 PCDHGC3Q9UN70 934 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 APOBEC2Q9Y235 224 aaKnown RBP9.07□□□□□ -0.96
NUP50-217ENST00000491860 PAXBP1Q9Y5B6 917 aa9.07□□□□□ -0.96
NUP50-217ENST00000491860 MUC22E2RYF6 1773 aaPredicted RBP9.07□□□□□ -0.96
NUP50-217ENST00000491860 EDDM13A0A1B0GTR0 161 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 FLRT2O43155 660 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 HSF2BPO75031 334 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 LETM1O95202 739 aaPredicted RBP9.06□□□□□ -0.96
NUP50-217ENST00000491860 LUC7L3O95232 432 aaKnown RBP9.06□□□□□ -0.96
NUP50-217ENST00000491860 TRUB2O95900 331 aaKnown RBP9.06□□□□□ -0.96
NUP50-217ENST00000491860 CAPNS1P04632 268 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 HLA-EP13747 358 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 CD59P13987 128 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 SLC6A4P31645 630 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 RPS14P62263 151 aaKnown RBP9.06□□□□□ -0.96
NUP50-217ENST00000491860 PDCLQ13371 301 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 TRIP6Q15654 476 aaKnown RBP9.06□□□□□ -0.96
NUP50-217ENST00000491860 HNRNPA1L2Q32P51 320 aaKnown RBP9.06□□□□□ -0.96
NUP50-217ENST00000491860 CT47A1Q5JQC4 288 aaPredicted RBP9.06□□□□□ -0.96
NUP50-217ENST00000491860 RFWD3Q6PCD5 774 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 DSG4Q86SJ6 1040 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 NAXDQ8IW45 347 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 CARNMT1Q8N4J0 409 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 CLEC4CQ8WTT0 213 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 CYB5D2Q8WUJ1 264 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 SORCS1Q8WY21 1168 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 SHC3Q92529 594 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 KAT5Q92993 513 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 ZSWIM1Q9BR11 485 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 GAREM1Q9H706 876 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 FAM204AQ9H8W3 233 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 STIM2Q9P246 746 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 EIF2B4Q9UI10 523 aaKnown RBP9.06□□□□□ -0.96
NUP50-217ENST00000491860 FZD4Q9ULV1 537 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 LOC400499M0QZD8 3231 aa9.06□□□□□ -0.96
NUP50-217ENST00000491860 ITIH6Q6UXX5 1313 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 GOLGA6L7A0A1B0GV03 622 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 A0A1B0GVM2 712 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 TCAF2A6NFQ2 919 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 LRRC72A6NJI9 287 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 KCNU1A8MYU2 1149 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 E5RJQ4 531 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 PIK3R2O00459 728 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 YKT6O15498 198 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 PAPSS1O43252 624 aaPredicted RBP9.05□□□□□ -0.96
NUP50-217ENST00000491860 GABBR2O75899 941 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 MOCS2O96007 188 aaPredicted RBP9.05□□□□□ -0.96
NUP50-217ENST00000491860 ADH1BP00325 375 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 IGLV3-25P01717 112 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 FYNP06241 537 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 TACR2P21452 398 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 CD27P26842 260 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 MAOBP27338 520 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 CD70P32970 193 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 KRT9P35527 623 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 NUDT1P36639 197 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 USP8P40818 1118 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 CSKP41240 450 aa9.05□□□□□ -0.96
NUP50-217ENST00000491860 MTIF2P46199 727 aaKnown RBP9.05□□□□□ -0.96
NUP50-217ENST00000491860 VASPP50552 380 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms