RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SLC14A1Q13336 389 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 DRAP1Q14919 205 aaPredicted RBP17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 SYCP1Q15431 976 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 TEAD4Q15561 434 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 HSP90AA4PQ58FG1 418 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 SH3PXD2AQ5TCZ1 1133 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 RAP1GAP2Q684P5 730 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 LRRC31Q6UY01 552 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 FAM71AQ8IYT1 594 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 SNX19Q92543 992 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 TTC17Q96AE7 1141 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 C18orf8Q96DM3 657 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 CPXM1Q96SM3 734 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 STK33Q9BYT3 514 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 SLC6A17Q9H1V8 727 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 SGK2Q9HBY8 427 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 CD248Q9HCU0 757 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 PCDHB9Q9Y5E1 797 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 VPS13AQ96RL7 3174 aa17.13■□□□□ 0.33
PDLIM2-217ENST00000491330 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 TARSL2A2RTX5 802 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 METTL12A8MUP2 240 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 LSM8O95777 96 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 IGLV3-19P01714 112 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 HLA-EP13747 358 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 CSKP41240 450 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 ECT2LQ008S8 904 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 ZNF177Q13360 481 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 N4BP2L1Q5TBK1 243 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 KLHDC7AQ5VTJ3 777 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 DCAF12L1Q5VU92 463 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 TMEM215Q68D42 235 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 SLC26A9Q7LBE3 791 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 DSG4Q86SJ6 1040 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 FAM124AQ86V42 546 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 SLC47A2Q86VL8 602 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 CFAP52Q8N1V2 620 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 RPRD1AQ96P16 312 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 SLC2A13Q96QE2 648 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 SPAG5Q96R06 1193 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 OMDQ99983 421 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 NUCKS1Q9H1E3 243 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 WDCPQ9H6R7 721 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 ACP6Q9NPH0 428 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 TPX2Q9ULW0 747 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 FARP1Q9Y4F1 1045 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 RALGAPA1Q6GYQ0 2036 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 SDK1Q7Z5N4 2213 aa17.12■□□□□ 0.33
PDLIM2-217ENST00000491330 MYOFQ9NZM1 2061 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 EDDM13A0A1B0GTR0 161 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 A0A1B0GVM2 712 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 TCAF2A6NFQ2 919 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 CDX4O14627 284 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 DAB1O75553 588 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 UCHL3P15374 230 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 MATKP42679 507 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 COPAP53621 1224 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 RNASE9P60153 205 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 MYL5Q02045 173 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 HNRNPA1L2Q32P51 320 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 PITRM1Q5JRX3 1037 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 BRMS1LQ5PSV4 323 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 NADSYN1Q6IA69 706 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 ZNF677Q86XU0 584 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 CACUL1Q86Y37 369 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 SLC41A1Q8IVJ1 513 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 MINDY1Q8N5J2 469 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 ZNF397Q8NF99 534 aaPredicted RBP17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 DNASE2BQ8WZ79 361 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 PRSS16Q9NQE7 514 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 CYTH4Q9UIA0 394 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 SLC25A13Q9UJS0 675 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 SPAG17Q6Q759 2223 aa17.11■□□□□ 0.33
PDLIM2-217ENST00000491330 KIAA1549LQ6ZVL6 1849 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 LRRC72A6NJI9 287 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 UPK3BL1B0FP48 263 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 UPK3BL2E5RIL1 263 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 M0QYT0 321 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 BCAT2O15382 392 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 CLDN11O75508 207 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 GRAP2O75791 330 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 CER1O95813 267 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 CCDC172P0C7W6 258 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 CYP11B1P15538 503 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 DESP17661 470 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 CLCN1P35523 988 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 SCNN1AP37088 669 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 SGSHP51688 502 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 DEUP1Q05D60 604 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 ZNF252P-AS1Q0IIN9 211 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 CCDC15Q0P6D6 951 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 SUZ12Q15022 739 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 MIIPQ5JXC2 388 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 FAM102AQ5T9C2 384 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 CDKAL1Q5VV42 579 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 FAM183BPQ6ZVS7 135 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 USP30Q70CQ3 517 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
PDLIM2-217ENST00000491330 CAPN10Q9HC96 672 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms