RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZNF510Q9Y2H8 683 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 NR5A2O00482 541 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 SPTLC1O15269 473 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 DENRO43583 198 aaKnown RBP11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 DNAJA2O60884 412 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 NAGLUP54802 743 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 ZBTB41Q5SVQ8 909 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 GRTP1Q5TC63 336 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 FRMD7Q6ZUT3 714 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 TFB1MQ8WVM0 346 aaKnown RBP11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 OTUD5Q96G74 571 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 MMP19Q99542 508 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 SEPHS2Q99611 448 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 TARS2Q9BW92 718 aaKnown RBP11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 ARMC7Q9H6L4 198 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 EPS8L2Q9H6S3 715 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 CISHQ9NSE2 258 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 GINS2Q9Y248 185 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 TMEM191CA6NGB0 347 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 SNX2O60749 519 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 MT-CO1P00395 513 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 LRPAP1P30533 357 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 PTGER2P43116 358 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 PRKAA2P54646 552 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 SLC18A2Q05940 514 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 FAM83EQ2M2I3 478 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 NPNTQ6UXI9 565 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 TNS4Q8IZW8 715 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 NPAS2Q99743 824 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CEP44Q9C0F1 390 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 TEKT2Q9UIF3 430 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 PTGES3LE9PB15 166 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 RAD51BO15315 384 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 XRCC1P18887 633 aaPredicted RBP11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CDKN2BP42772 138 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CRKP46108 304 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 THOP1P52888 689 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 GPSM2P81274 684 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 BBS5Q8N3I7 341 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 POC5Q8NA72 575 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 PDPRQ8NCN5 879 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 BPIFB6Q8NFQ5 453 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 FBXO27Q8NI29 283 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 LRTOMTQ8WZ04 291 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 RORBQ92753 470 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 ELMO2Q96JJ3 720 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 ZBTB18Q99592 522 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 YIPF2Q9BWQ6 316 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 ABCB10Q9NRK6 738 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 PIH1D1Q9NWS0 290 aaKnown RBP11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 RAP2CQ9Y3L5 183 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 TMEM63AO94886 807 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CDH2P19022 906 aaPredicted RBP11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 PSMB9P28065 219 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 ADSSP30520 456 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 AVPR1AP37288 418 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 KCNK10P57789 538 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 TUBA4AP68366 448 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CHRNB3Q05901 458 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CCNIQ14094 377 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 ZNF568Q3ZCX4 644 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 UTS2BQ765I0 119 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 PTF1AQ7RTS3 328 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 IRGQQ8WZA9 623 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 BIRC8Q96P09 236 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 NACA2Q9H009 215 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 PADI4Q9UM07 663 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 EFR3BQ9Y2G0 817 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 ACOT9Q9Y305 439 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 TMEM114B3SHH9 223 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 SNPHO15079 494 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 SF3B1O75533 1304 aaKnown RBP eCLIP11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 MGAT1P26572 445 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 HOXD13P35453 343 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 GNA12Q03113 381 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CDK18Q07002 472 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 NAB1Q13506 487 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 HNRNPDQ14103 355 aaKnown RBP11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 FAM160B1Q5W0V3 765 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 UNC5AQ6ZN44 842 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 MON1BQ7L1V2 547 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 C12orf56Q8IXR9 622 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 ITPKCQ96DU7 683 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CPNE1Q99829 537 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 PKP2Q99959 881 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CCDC106Q9BWC9 280 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 MRPL4Q9BYD3 311 aaKnown RBP11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 BCAS3Q9H6U6 928 aa11.53□□□□□ -0.56
CRNKL1-204ENST00000490910 CNTNAP2Q9UHC6 1331 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 PDZK1P1A8MUH7 402 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 SEC24AO95486 1093 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 IDO1P14902 403 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 PGAM1P18669 254 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 GTF2BQ00403 316 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 MMRN1Q13201 1228 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 FUT11Q495W5 492 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT2A3Q6UWM9 527 aa11.52□□□□□ -0.56
CRNKL1-204ENST00000490910 STK32CQ86UX6 486 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms