RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 FAM90A20PA6NIJ5 464 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 CNTN5O94779 1100 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 HEXIM1O94992 359 aaKnown RBP6.3□□□□□ -1.4
VPS26A-206ENST00000489794 FBLP22087 321 aaKnown RBP6.3□□□□□ -1.4
VPS26A-206ENST00000489794 RPS6KB1P23443 525 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 CTXN3Q4LDR2 81 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 RFX6Q8HWS3 928 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 USP38Q8NB14 1042 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.3□□□□□ -1.4
VPS26A-206ENST00000489794 MAP4K1Q92918 833 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS26A-206ENST00000489794 KCND3Q9UK17 655 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 FEM1BQ9UK73 627 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 DERAQ9Y315 318 aa6.3□□□□□ -1.4
VPS26A-206ENST00000489794 AGAP5A6NIR3 686 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 C16orf96A6NNT2 1141 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 CREB3O43889 395 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 KRT38O76015 456 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 PLAUP00749 431 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 RFPL3SP0C7P2 107 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 TFEBP19484 476 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 IDUAP35475 653 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 OAZ1P54368 228 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 KRTAP1-1Q07627 177 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 TAF12Q16514 161 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 DHRS13Q6UX07 377 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 SYT13Q7L8C5 426 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 ADGRF3Q8IZF5 1079 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 ZFPM2Q8WW38 1151 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 KTI12Q96EK9 354 aaPredicted RBP6.29□□□□□ -1.4
VPS26A-206ENST00000489794 POLR3GLQ9BT43 218 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 GATA5Q9BWX5 397 aaPredicted RBP6.29□□□□□ -1.4
VPS26A-206ENST00000489794 IPO11Q9UI26 975 aaKnown RBP6.29□□□□□ -1.4
VPS26A-206ENST00000489794 LZTS1Q9Y250 596 aa6.29□□□□□ -1.4
VPS26A-206ENST00000489794 RRHO14718 337 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 NPHP1O15259 732 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 ALDOCP09972 364 aaKnown RBP6.28□□□□□ -1.4
VPS26A-206ENST00000489794 CHN1P15882 459 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 EPHB2P29323 1055 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 GHRHRQ02643 423 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 MTA1Q13330 715 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 ANKRD1Q15327 319 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 ZNF474Q6S9Z5 364 aaPredicted RBP6.28□□□□□ -1.4
VPS26A-206ENST00000489794 ZNF66Q6ZN08 573 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 HERC6Q8IVU3 1022 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 OR52N4Q8NGI2 321 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 CUL5Q93034 780 aa6.28□□□□□ -1.4
VPS26A-206ENST00000489794 RRP7AQ9Y3A4 280 aaKnown RBP6.28□□□□□ -1.4
VPS26A-206ENST00000489794 ZNF335Q9H4Z2 1342 aaPredicted RBP6.27□□□□□ -1.41
VPS26A-206ENST00000489794 CYP2D7A0A087X1C5 515 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 CCNT1O60563 726 aaKnown RBP6.27□□□□□ -1.41
VPS26A-206ENST00000489794 KAT7O95251 611 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 PNPLA4P41247 253 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 SOX2P48431 317 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 ADPRHP54922 357 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 SEC23BQ15437 767 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 SLC9C1Q4G0N8 1177 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 LIPMQ5VYY2 423 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 CYP26C1Q6V0L0 522 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 TFAP2DQ7Z6R9 452 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 NEK8Q86SG6 692 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 RHPN2Q8IUC4 686 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 PAQR4Q8N4S7 273 aaPredicted RBP6.27□□□□□ -1.41
VPS26A-206ENST00000489794 CSGALNACT1Q8TDX6 532 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 ATP2A3Q93084 1043 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 ARRDC3Q96B67 414 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 TM2D2Q9BX73 214 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 CHODLQ9H9P2 273 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 NRIP3Q9NQ35 241 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 LMTK3Q96Q04 1460 aa6.27□□□□□ -1.41
VPS26A-206ENST00000489794 B9A039 149 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 MCIDASD6RGH6 385 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 GRM8O00222 908 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 TSPAN3O60637 253 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 CELA2AP08217 269 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 HOXB9P17482 250 aaPredicted RBP6.26□□□□□ -1.41
VPS26A-206ENST00000489794 RPS13P62277 151 aaKnown RBP6.26□□□□□ -1.41
VPS26A-206ENST00000489794 CDK18Q07002 472 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 PDCLQ13371 301 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 ALKBH1Q13686 389 aaKnown RBP6.26□□□□□ -1.41
VPS26A-206ENST00000489794 CEP78Q5JTW2 689 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 DPY19L2P1Q6NXN4 242 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 CEP70Q8NHQ1 597 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 CLEC4CQ8WTT0 213 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 USP13Q92995 863 aaPredicted RBP6.26□□□□□ -1.41
VPS26A-206ENST00000489794 SUFUQ9UMX1 484 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 SLC8A2Q9UPR5 921 aa6.26□□□□□ -1.41
VPS26A-206ENST00000489794 BCAR3O75815 825 aa6.25□□□□□ -1.41
VPS26A-206ENST00000489794 RXRAP19793 462 aa6.25□□□□□ -1.41
VPS26A-206ENST00000489794 HOXA7P31268 230 aaPredicted RBP6.25□□□□□ -1.41
VPS26A-206ENST00000489794 STAT1P42224 750 aa6.25□□□□□ -1.41
VPS26A-206ENST00000489794 YPEL5P62699 121 aa6.25□□□□□ -1.41
VPS26A-206ENST00000489794 SHC2P98077 582 aa6.25□□□□□ -1.41
VPS26A-206ENST00000489794 CFHR1Q03591 330 aa6.25□□□□□ -1.41
VPS26A-206ENST00000489794 STIM1Q13586 685 aa6.25□□□□□ -1.41
VPS26A-206ENST00000489794 THOC5Q13769 683 aaKnown RBP6.25□□□□□ -1.41
VPS26A-206ENST00000489794 EZH2Q15910 746 aaKnown RBP6.25□□□□□ -1.41
VPS26A-206ENST00000489794 EARS2Q5JPH6 523 aaKnown RBP6.25□□□□□ -1.41
VPS26A-206ENST00000489794 DEF8Q6ZN54 512 aa6.25□□□□□ -1.41
VPS26A-206ENST00000489794 SUGP1Q8IWZ8 645 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms