RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 GOLGA6L7A0A1B0GV03 622 aa20.16■□□□□ 0.82
APTX-229ENST00000489583 TAF4O00268 1085 aa20.16■□□□□ 0.82
APTX-229ENST00000489583 MOCS2O96007 188 aaPredicted RBP20.16■□□□□ 0.82
APTX-229ENST00000489583 CSKP41240 450 aa20.16■□□□□ 0.82
APTX-229ENST00000489583 ACADSBP45954 432 aa20.16■□□□□ 0.82
APTX-229ENST00000489583 SGSHP51688 502 aa20.16■□□□□ 0.82
APTX-229ENST00000489583 HNRNPA1L2Q32P51 320 aaKnown RBP20.16■□□□□ 0.82
APTX-229ENST00000489583 DHX40Q8IX18 779 aaKnown RBP20.16■□□□□ 0.82
APTX-229ENST00000489583 KDM1BQ8NB78 822 aa20.16■□□□□ 0.82
APTX-229ENST00000489583 TTC17Q96AE7 1141 aa20.16■□□□□ 0.82
APTX-229ENST00000489583 DHTKD1Q96HY7 919 aaPredicted RBP20.16■□□□□ 0.82
APTX-229ENST00000489583 GPSM3Q9Y4H4 160 aa20.16■□□□□ 0.82
APTX-229ENST00000489583 DMXL2Q8TDJ6 3036 aa20.16■□□□□ 0.82
APTX-229ENST00000489583 PKD1L2Q7Z442 2459 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 DSPP15924 2871 aaKnown RBP20.15■□□□□ 0.82
APTX-229ENST00000489583 EDDM13A0A1B0GTR0 161 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 TARSL2A2RTX5 802 aaKnown RBP20.15■□□□□ 0.82
APTX-229ENST00000489583 P4HA2O15460 535 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 YKT6O15498 198 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 MED7O43513 233 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 IGLV3-27P01718 113 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 SRPRAP08240 638 aaKnown RBP20.15■□□□□ 0.82
APTX-229ENST00000489583 BRD2P25440 801 aaKnown RBP20.15■□□□□ 0.82
APTX-229ENST00000489583 HNF1BP35680 557 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 NNTQ13423 1086 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 CST6Q15828 149 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 PKDCCQ504Y2 493 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 FAM133BQ5BKY9 247 aaKnown RBP20.15■□□□□ 0.82
APTX-229ENST00000489583 BAHD1Q8TBE0 780 aaPredicted RBP20.15■□□□□ 0.82
APTX-229ENST00000489583 PPP1R9BQ96SB3 815 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 WDFY3Q8IZQ1 3526 aa20.15■□□□□ 0.82
APTX-229ENST00000489583 A0A1W2PPC4 97 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 BICDL2A1A5D9 508 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 TRIM49BA6NDI0 452 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 H0Y8X5 98 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 KCNK3O14649 394 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 VILLO15195 856 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 SIN3BO75182 1162 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 ADH1BP00325 375 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 ITGAVP06756 1048 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 CDK4P11802 303 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 KRT5P13647 590 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 SLC6A4P31645 630 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 ARRB1P49407 418 aaPredicted RBP20.14■□□□□ 0.81
APTX-229ENST00000489583 ECT2LQ008S8 904 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 NCEH1Q6PIU2 408 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 SND1Q7KZF4 910 aaKnown RBP eCLIP20.14■□□□□ 0.81
APTX-229ENST00000489583 MMAAQ8IVH4 418 aaKnown RBP20.14■□□□□ 0.81
APTX-229ENST00000489583 ZC3H3Q8IXZ2 948 aaKnown RBP20.14■□□□□ 0.81
APTX-229ENST00000489583 FMR1NBQ8N0W7 255 aaPredicted RBP20.14■□□□□ 0.81
APTX-229ENST00000489583 PDCD7Q8N8D1 485 aaKnown RBP20.14■□□□□ 0.81
APTX-229ENST00000489583 OR2T34Q8NGX1 318 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 WFDC5Q8TCV5 224 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 HNRNPLLQ8WVV9 542 aaKnown RBP20.14■□□□□ 0.81
APTX-229ENST00000489583 TFAP2BQ92481 460 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 FZD4Q9ULV1 537 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 ERVW-1Q9UQF0 538 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 BTBD3Q9Y2F9 522 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 ATRXP46100 2492 aa20.14■□□□□ 0.81
APTX-229ENST00000489583 A0A1W2PP55 124 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 PMM2O15305 246 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 MID1O15344 667 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 LUC7L3O95232 432 aaKnown RBP20.13■□□□□ 0.81
APTX-229ENST00000489583 SLC8A1P32418 973 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 CTSKP43235 329 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 GALCP54803 685 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 RPS24P62847 133 aaKnown RBP20.13■□□□□ 0.81
APTX-229ENST00000489583 IL9RQ01113 521 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 COL28A1Q2UY09 1125 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 MS4A13Q5J8X5 152 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 PITRM1Q5JRX3 1037 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 LAYNQ6UX15 382 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 DSG4Q86SJ6 1040 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 PDZD3Q86UT5 571 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 CHSY1Q86X52 802 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 SCUBE3Q8IX30 993 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 LGI2Q8N0V4 545 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 DQX1Q8TE96 717 aaKnown RBP20.13■□□□□ 0.81
APTX-229ENST00000489583 CLEC4CQ8WTT0 213 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 RNF34Q969K3 372 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 MED15Q96RN5 788 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 GDF3Q9NR23 364 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 RAXQ9Y2V3 346 aa20.13■□□□□ 0.81
APTX-229ENST00000489583 ANKRD11Q6UB99 2663 aaPredicted RBP20.13■□□□□ 0.81
APTX-229ENST00000489583 F5H5T6 163 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 GNA14O95837 355 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 CAPNS1P04632 268 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 C7P10643 843 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 CD38P28907 300 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 PSMD8P48556 350 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 PMS1P54277 932 aaKnown RBP20.12■□□□□ 0.81
APTX-229ENST00000489583 OXCT1P55809 520 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 GCNT1Q02742 428 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 SULT2A1Q06520 285 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 SLC12A1Q13621 1099 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 KLHL10Q6JEL2 608 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 RRAGAQ7L523 313 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 CFAP52Q8N1V2 620 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 UBR7Q8N806 425 aa20.12■□□□□ 0.81
APTX-229ENST00000489583 ATP6V0D2Q8N8Y2 350 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms