RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TCAF2A6NFQ2 919 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 GJB6O95452 261 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 DESP17661 470 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 POLR2EP19388 210 aaKnown RBP17.91■□□□□ 0.46
MDC1-206ENST00000489540 GPD1P21695 349 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 CD70P32970 193 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 WASP42768 502 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 ATXN1P54253 815 aaKnown RBP17.91■□□□□ 0.46
MDC1-206ENST00000489540 ENPP2Q13822 863 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 SIM2Q14190 667 aaPredicted RBP17.91■□□□□ 0.46
MDC1-206ENST00000489540 ARL13BQ3SXY8 428 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 C5orf22Q49AR2 442 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 MBLAC2Q68D91 279 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 ANO7Q6IWH7 933 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 DCUN1D2Q6PH85 259 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 LRRC31Q6UY01 552 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 ASCL5Q7RTU5 278 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 FAM131BQ86XD5 332 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 VSTM4Q8IW00 320 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 DRC7Q8IY82 874 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 SUMF1Q8NBK3 374 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 WFDC5Q8TCV5 224 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 GAB3Q8WWW8 586 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 TRIM11Q96F44 468 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 PPP1R9BQ96SB3 815 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.91■□□□□ 0.46
MDC1-206ENST00000489540 CACNA2D2Q9NY47 1150 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 RAB23Q9ULC3 237 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 VANGL2Q9ULK5 521 aa17.91■□□□□ 0.46
MDC1-206ENST00000489540 A0A1W2PQF6 199 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 TCRBV21S2A2A0A5A6 115 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 RPP40O75818 363 aaKnown RBP17.9■□□□□ 0.46
MDC1-206ENST00000489540 MOCS3O95396 460 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 TPM1P09493 284 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 DLDP09622 509 aaKnown RBP17.9■□□□□ 0.46
MDC1-206ENST00000489540 MYBL1P10243 752 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
MDC1-206ENST00000489540 HNRNPH3P31942 346 aaKnown RBP17.9■□□□□ 0.46
MDC1-206ENST00000489540 ZNF143P52747 638 aaPredicted RBP17.9■□□□□ 0.46
MDC1-206ENST00000489540 LMAN2Q12907 356 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 SLC12A1Q13621 1099 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 ZNF234Q14588 700 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 CDO1Q16878 200 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 C15orf59Q2T9L4 293 aaPredicted RBP17.9■□□□□ 0.46
MDC1-206ENST00000489540 USP39Q53GS9 565 aaKnown RBP17.9■□□□□ 0.46
MDC1-206ENST00000489540 PPP1R15BQ5SWA1 713 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 SARM1Q6SZW1 724 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 CEP68Q76N32 757 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 CCAR2Q8N163 923 aaKnown RBP17.9■□□□□ 0.46
MDC1-206ENST00000489540 IGSF8Q969P0 613 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 TTC17Q96AE7 1141 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 ISCUQ9H1K1 167 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 ANLNQ9NQW6 1124 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 ADAMTS1Q9UHI8 967 aa17.9■□□□□ 0.46
MDC1-206ENST00000489540 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.89■□□□□ 0.46
MDC1-206ENST00000489540 WASH3PC4AMC7 463 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 CLDN11O75508 207 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 ASLP04424 464 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 ADRA1BP35368 520 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 IL12RB1P42701 662 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 CDH4P55283 916 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 ZNF177Q13360 481 aaPredicted RBP17.89■□□□□ 0.46
MDC1-206ENST00000489540 MAMLD1Q13495 774 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 STARD3Q14849 445 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 TSR1Q2NL82 804 aaKnown RBP17.89■□□□□ 0.46
MDC1-206ENST00000489540 FSCBQ5H9T9 825 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 PLEKHA7Q6IQ23 1121 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 C14orf80Q86SX3 495 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 MDGA1Q8NFP4 955 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 OR8K1Q8NGG5 319 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 FAM172AQ8WUF8 416 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 HMGB4Q8WW32 186 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 SORCS1Q8WY21 1168 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 MCEEQ96PE7 176 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 CNPY3Q9BT09 278 aa17.89■□□□□ 0.46
MDC1-206ENST00000489540 BCCIPQ9P287 314 aaKnown RBP eCLIP17.89■□□□□ 0.46
MDC1-206ENST00000489540 SMG5Q9UPR3 1016 aaKnown RBP17.89■□□□□ 0.46
MDC1-206ENST00000489540 DRGXA6NNA5 263 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 I6L893 689 aaPredicted RBP17.89■□□□□ 0.45
MDC1-206ENST00000489540 SYNCRIPO60506 623 aaKnown RBP17.89■□□□□ 0.45
MDC1-206ENST00000489540 HDAC4P56524 1084 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 RPL7AP62424 266 aaKnown RBP17.89■□□□□ 0.45
MDC1-206ENST00000489540 SRSF5Q13243 272 aaKnown RBP17.89■□□□□ 0.45
MDC1-206ENST00000489540 BYSLQ13895 437 aaKnown RBP17.89■□□□□ 0.45
MDC1-206ENST00000489540 FUT11Q495W5 492 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 SH3PXD2AQ5TCZ1 1133 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 SERPINA13PQ6UXR4 307 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 PRR23BQ6ZRT6 265 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 C11orf74Q86VG3 221 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 PGBD3Q8N328 593 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 OSBPL2Q9H1P3 480 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 CD248Q9HCU0 757 aa17.89■□□□□ 0.45
MDC1-206ENST00000489540 ZNHIT6Q9NWK9 470 aaKnown RBP17.89■□□□□ 0.45
MDC1-206ENST00000489540 CNOT8Q9UFF9 292 aaKnown RBP17.89■□□□□ 0.45
MDC1-206ENST00000489540 ATG2BQ96BY7 2078 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 PIEZO1Q92508 2521 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 E9PAM4 449 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 GGCXP38435 758 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 PLK1P53350 603 aa17.88■□□□□ 0.45
MDC1-206ENST00000489540 FNDC3BQ53EP0 1204 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms