RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 FBXL12Q9NXK8 326 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 ARHGAP20Q9P2F6 1191 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 PCDHA12Q9UN75 941 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 SH3BP1Q9Y3L3 701 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 PCDHGA3Q9Y5H0 932 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 CACNA1CQ13936 2221 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 FER1L5A0AVI2 2057 aa7.88□□□□□ -1.15
EXOSC3-206ENST00000489414 LOC101059948A0A1B0GTJ6 334 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 A0A1W2PQM1 296 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 SLC12A8A0AV02 714 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 ERICH2A1L162 156 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 ZSCAN5CA6NGD5 496 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 ATP2C2O75185 946 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 LRCH4O75427 683 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 DGAT1O75907 488 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 DNAJB5O75953 348 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 LILRA4P59901 499 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 MYL7Q01449 175 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 ANKRD1Q15327 319 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 PDLIM3Q53GG5 364 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 NT5DC1Q5TFE4 455 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 SLC6A19Q695T7 634 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 TPGS1Q6ZTW0 290 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 RD3Q7Z3Z2 195 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 APBB1IPQ7Z5R6 666 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 PACS2Q86VP3 889 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 FJX1Q86VR8 437 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 APLFQ8IW19 511 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 ZNF654Q8IZM8 581 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 ST6GALNAC3Q8NDV1 305 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 ZNF548Q8NEK5 533 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 SORCS1Q8WY21 1168 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 GOLGA1Q92805 767 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 WBP2Q969T9 261 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 KIAA1143Q96AT1 154 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 KLHDC7BQ96G42 594 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 JAKMIP1Q96N16 626 aaKnown RBP7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 NACC1Q96RE7 527 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 LXNQ9BS40 222 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 C2orf40Q9H1Z8 148 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 NEUROG2Q9H2A3 272 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 ELOVL2Q9NXB9 296 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 SCML1Q9UN30 329 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 LIMCH1Q9UPQ0 1083 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 OSGIN2Q9Y236 505 aa7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 RBM8AQ9Y5S9 174 aaKnown RBP7.87□□□□□ -1.15
EXOSC3-206ENST00000489414 FAM171A2A8MVW0 826 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 PPEF2O14830 753 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 MAP3K6O95382 1288 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 LY6G6DO95868 133 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 PDIA4P13667 645 aaKnown RBP7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 NOS2P35228 1153 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 PPP3CCP48454 512 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 USP46P62068 366 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 CUL4AQ13619 759 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 STAT4Q14765 748 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 EIF4HQ15056 248 aaKnown RBP7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 NFE2Q16621 373 aaPredicted RBP7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 IMMTQ16891 758 aaKnown RBP7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 CREB3L3Q68CJ9 461 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 ZNF776Q68DI1 518 aaPredicted RBP7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 SLC35F3Q8IY50 421 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 GANCQ8TET4 914 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 IFT43Q96FT9 208 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 PRSS16Q9NQE7 514 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 CCM2LQ9NUG4 571 aaPredicted RBP7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 PDRG1Q9NUG6 133 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 DSEQ9UL01 958 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 FZD4Q9ULV1 537 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 CA5BQ9Y2D0 317 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 PCDHGA9Q9Y5G4 932 aaKnown RBP7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 CSNK1G3Q9Y6M4 447 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 SCN1AP35498 2009 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 ZANQ9Y493 2812 aa7.86□□□□□ -1.15
EXOSC3-206ENST00000489414 WNK1Q9H4A3 2382 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 CNTRLQ7Z7A1 2325 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 A0A1B0GUH1 482 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 A0A1W2PP55 124 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 C19orf84I3L1E1 186 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 SLC27A2O14975 620 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 GREM1O60565 184 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 RPLP0P05388 317 aaKnown RBP7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 FURINP09958 794 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 CCL4P13236 92 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 LIG1P18858 919 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 RECQLP46063 649 aaPredicted RBP7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 RPIAP49247 311 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 ADPRHP54922 357 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 HNRNPKP61978 463 aaKnown RBP eCLIP7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 CCL7P80098 99 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 PTK2BQ14289 1009 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 NECTIN1Q15223 517 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 TSR1Q2NL82 804 aaKnown RBP7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 DEFB133Q30KQ1 61 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 DCAF10Q5QP82 559 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 PPP4R3AQ6IN85 833 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 BLOC1S2Q6QNY1 142 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 LINGO4Q6UY18 593 aa7.85□□□□□ -1.15
EXOSC3-206ENST00000489414 CLEC17AQ6ZS10 378 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms