RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 CHADO15335 359 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 ZRANB2O95218 330 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRAIP-209ENST00000488860 ADH1CP00326 375 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 ADH5P11766 374 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 PEX5P50542 639 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 ARSEP51690 589 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 ETF1P62495 437 aaKnown RBP12.7□□□□□ -0.38
TRAIP-209ENST00000488860 DYNLT1P63172 113 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 NRG1Q02297 640 aaPredicted RBP12.7□□□□□ -0.38
TRAIP-209ENST00000488860 SEMA3BQ13214 749 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 DHCR24Q15392 516 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 MPPE1Q53F39 396 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 MANEALQ5VSG8 457 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 TTC39BQ5VTQ0 682 aaPredicted RBP12.7□□□□□ -0.38
TRAIP-209ENST00000488860 DCAF12L1Q5VU92 463 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 MFSD7Q6UXD7 560 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 SPOCD1Q6ZMY3 1216 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 RFX8Q6ZV50 586 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 TFAP2DQ7Z6R9 452 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 TMEM25Q86YD3 366 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 ZNF683Q8IZ20 524 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 RCOR2Q8IZ40 523 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 CARNMT1Q8N4J0 409 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 EXD1Q8NHP7 514 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.7□□□□□ -0.38
TRAIP-209ENST00000488860 CSGALNACT1Q8TDX6 532 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 ATXN2LQ8WWM7 1075 aaKnown RBP12.7□□□□□ -0.38
TRAIP-209ENST00000488860 TMA16Q96EY4 203 aaKnown RBP12.7□□□□□ -0.38
TRAIP-209ENST00000488860 CSPG4P5Q96PW8 444 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 ZNF670Q9BS34 389 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 MAK16Q9BXY0 300 aaKnown RBP12.7□□□□□ -0.38
TRAIP-209ENST00000488860 ZYG11BQ9C0D3 744 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 HPS4Q9NQG7 708 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 SPHK2Q9NRA0 654 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 IGSF9Q9P2J2 1179 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 PRKAG3Q9UGI9 489 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 NEU3Q9UQ49 428 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 CHD5Q8TDI0 1954 aa12.7□□□□□ -0.38
TRAIP-209ENST00000488860 C3orf70A6NLC5 250 aaPredicted RBP12.69□□□□□ -0.38
TRAIP-209ENST00000488860 ESPNB1AK53 854 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 CNTN5O94779 1100 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 PYGMP11217 842 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 KRT10P13645 584 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 TYRP14679 529 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 AMPD1P23109 780 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 CETN2P41208 172 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 ZNF135P52742 658 aaPredicted RBP12.69□□□□□ -0.38
TRAIP-209ENST00000488860 RUNX3Q13761 415 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 ALFQ53S48 1182 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 ANKRD20A8PQ5CZ79 823 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 TFDP3Q5H9I0 405 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 CCDC117Q8IWD4 279 aaPredicted RBP12.69□□□□□ -0.38
TRAIP-209ENST00000488860 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 IRF7Q92985 503 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 NXPE3Q969Y0 559 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 ASB2Q96Q27 587 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 ECT2Q9H8V3 914 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 ARHGEF4Q9NR80 690 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 GTSE1Q9NYZ3 720 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 RCOR3Q9P2K3 495 aaPredicted RBP12.69□□□□□ -0.38
TRAIP-209ENST00000488860 PPARGC1AQ9UBK2 798 aaKnown RBP12.69□□□□□ -0.38
TRAIP-209ENST00000488860 SNX12Q9UMY4 172 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 MFHAS1Q9Y4C4 1052 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 UNC80Q8N2C7 3258 aa12.69□□□□□ -0.38
TRAIP-209ENST00000488860 IGLV3-10A0A075B6K4 115 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 hCG_1818297A0A087WSY0 165 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 A0A1B0GVM2 712 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 TCAF2A6NFQ2 919 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 H0Y626 953 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 KIF2AO00139 706 aaPredicted RBP12.68□□□□□ -0.38
TRAIP-209ENST00000488860 APOL1O14791 398 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 FANCGO15287 622 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 FGF10O15520 208 aaPredicted RBP12.68□□□□□ -0.38
TRAIP-209ENST00000488860 NARSO43776 548 aaKnown RBP12.68□□□□□ -0.38
TRAIP-209ENST00000488860 CEP104O60308 925 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 LUC7L3O95232 432 aaKnown RBP12.68□□□□□ -0.38
TRAIP-209ENST00000488860 RHOQP17081 205 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 ERCC2P18074 760 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 HOXD9P28356 352 aaPredicted RBP12.68□□□□□ -0.38
TRAIP-209ENST00000488860 HOXC13P31276 330 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 HTR7P34969 479 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 CDKN2BP42772 138 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 NUMBP49757 651 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 GAD2Q05329 585 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 NR1H3Q13133 447 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 CDH18Q13634 790 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 DPYSQ14117 519 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 CCDC181Q5TID7 509 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 FYB2Q5VWT5 728 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 RHBDF2Q6PJF5 856 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 ANKS1BQ7Z6G8 1248 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 MFN1Q8IWA4 741 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 ADGRG2Q8IZP9 1017 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 SLC44A3Q8N4M1 653 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 NAT16Q8N8M0 369 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 FAM71BQ8TC56 605 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 UBE2Q2Q8WVN8 375 aa12.68□□□□□ -0.38
TRAIP-209ENST00000488860 TSC1Q92574 1164 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms