RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 C15orf59Q2T9L4 293 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-207ENST00000486572 ACBD5Q5T8D3 534 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-207ENST00000486572 STRADAQ7RTN6 431 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 ADIPOR2Q86V24 386 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 SUMF1Q8NBK3 374 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 MDGA1Q8NFP4 955 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 MCEEQ96PE7 176 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 SIK2Q9H0K1 926 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 VANGL2Q9ULK5 521 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 STON1Q9Y6Q2 735 aa18.8■□□□□ 0.6
COL1A1-207ENST00000486572 ZFHX2Q9C0A1 2572 aaPredicted RBP18.8■□□□□ 0.6
COL1A1-207ENST00000486572 A0A1W2PQF6 199 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 HRO43593 1189 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-207ENST00000486572 LMAN2Q12907 356 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 SRSF5Q13243 272 aaKnown RBP18.79■□□□□ 0.6
COL1A1-207ENST00000486572 ENPP2Q13822 863 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 ZNF234Q14588 700 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 FUT11Q495W5 492 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 PPP1R15BQ5SWA1 713 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 MBLAC2Q68D91 279 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 WDR59Q6PJI9 974 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 VPS36Q86VN1 386 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 CIR1Q86X95 450 aaPredicted RBP18.79■□□□□ 0.6
COL1A1-207ENST00000486572 VSTM4Q8IW00 320 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 CCAR2Q8N163 923 aaKnown RBP18.79■□□□□ 0.6
COL1A1-207ENST00000486572 GAB3Q8WWW8 586 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 SORCS1Q8WY21 1168 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 IGSF8Q969P0 613 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 LMLNQ96KR4 655 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 BCCIPQ9P287 314 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL1A1-207ENST00000486572 SMG5Q9UPR3 1016 aaKnown RBP18.79■□□□□ 0.6
COL1A1-207ENST00000486572 VPS13AQ96RL7 3174 aa18.79■□□□□ 0.6
COL1A1-207ENST00000486572 MYO15AQ9UKN7 3530 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 WASH3PC4AMC7 463 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 RTN2O75298 545 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 RPP40O75818 363 aaKnown RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 FTLP02792 175 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 ATP5BP06576 529 aaKnown RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 POLR2EP19388 210 aaKnown RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 IL12RB1P42701 662 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 ZNF143P52747 638 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 RPL7AP62424 266 aaKnown RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 SIM2Q14190 667 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 STARD3Q14849 445 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 ARL13BQ3SXY8 428 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 C5orf22Q49AR2 442 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 RAB6CQ53S08 254 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 FSCBQ5H9T9 825 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 SH3PXD2AQ5TCZ1 1133 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 DCUN1D2Q6PH85 259 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 SARM1Q6SZW1 724 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 PRR23BQ6ZRT6 265 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 FAM172AQ8WUF8 416 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 HMGB4Q8WW32 186 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 CENPIQ92674 756 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 TRIM11Q96F44 468 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 C1orf74Q96LT6 269 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 HAPLN3Q96S86 360 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 TPSD1Q9BZJ3 242 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 RAB6CQ9H0N0 254 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 CD248Q9HCU0 757 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 TMPRSS4Q9NRS4 437 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 PARVAQ9NVD7 372 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 KIAA1522Q9P206 1035 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 ADAMTS1Q9UHI8 967 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 RAB23Q9ULC3 237 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 PLA2G4CQ9UP65 541 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 RAD54BQ9Y620 910 aa18.78■□□□□ 0.6
COL1A1-207ENST00000486572 MUC22E2RYF6 1773 aaPredicted RBP18.78■□□□□ 0.6
COL1A1-207ENST00000486572 MYO18AQ92614 2054 aaKnown RBP18.77■□□□□ 0.6
COL1A1-207ENST00000486572 ATMINO43313 823 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-207ENST00000486572 MOCS3O95396 460 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 PLEKP08567 350 aaPredicted RBP18.77■□□□□ 0.6
COL1A1-207ENST00000486572 TPM1P09493 284 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 DLDP09622 509 aaKnown RBP18.77■□□□□ 0.6
COL1A1-207ENST00000486572 HNRNPH3P31942 346 aaKnown RBP18.77■□□□□ 0.6
COL1A1-207ENST00000486572 IRAK1P51617 712 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 HDAC4P56524 1084 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 MAMLD1Q13495 774 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 PITRM1Q5JRX3 1037 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 PLEKHA7Q6IQ23 1121 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 KIAA1211LQ6NV74 962 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 SERPINA13PQ6UXR4 307 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 LRRC31Q6UY01 552 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 CEP68Q76N32 757 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 C14orf80Q86SX3 495 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 DNAAF5Q86Y56 855 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 CYB5D2Q8WUJ1 264 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.77■□□□□ 0.6
COL1A1-207ENST00000486572 ISCUQ9H1K1 167 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 INTS6Q9UL03 887 aaKnown RBP18.77■□□□□ 0.6
COL1A1-207ENST00000486572 SNX10Q9Y5X0 201 aa18.77■□□□□ 0.6
COL1A1-207ENST00000486572 ZBTB24O43167 697 aaPredicted RBP18.76■□□□□ 0.59
COL1A1-207ENST00000486572 CCP110O43303 1012 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 CLDN11O75508 207 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 MYBL1P10243 752 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 DESP17661 470 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 GABRG2P18507 467 aa18.76■□□□□ 0.59
COL1A1-207ENST00000486572 ADRA1BP35368 520 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms