RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ZNF776Q68DI1 518 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-214ENST00000486311 IL27RAQ6UWB1 636 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 GBP6Q6ZN66 633 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 NAXDQ8IW45 347 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 CCDC117Q8IWD4 279 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-214ENST00000486311 CFAP52Q8N1V2 620 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 KDM1BQ8NB78 822 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 GATA6Q92908 595 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 MRGPRX3Q96LB0 322 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 CAMK1GQ96NX5 476 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 BTBD1Q9H0C5 482 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 RSPH9Q9H1X1 276 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-214ENST00000486311 APEX2Q9UBZ4 518 aa23.22■■□□□ 1.31
SREBF1-214ENST00000486311 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-214ENST00000486311 IGF2RP11717 2491 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 LUC7L3O95232 432 aaKnown RBP23.21■■□□□ 1.31
SREBF1-214ENST00000486311 SEMA4FO95754 770 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 TRUB2O95900 331 aaKnown RBP23.21■■□□□ 1.31
SREBF1-214ENST00000486311 ZNF883P0CG24 379 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 RDXP35241 583 aaKnown RBP23.21■■□□□ 1.31
SREBF1-214ENST00000486311 EIF4EBP2Q13542 120 aaPredicted RBP23.21■■□□□ 1.31
SREBF1-214ENST00000486311 ARID5BQ14865 1188 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 TRIP6Q15654 476 aaKnown RBP23.21■■□□□ 1.31
SREBF1-214ENST00000486311 CAMK4Q16566 473 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 ZNF423Q2M1K9 1284 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 HNRNPA1L2Q32P51 320 aaKnown RBP23.21■■□□□ 1.31
SREBF1-214ENST00000486311 SMYD5Q6GMV2 418 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 IRF2BP1Q8IU81 584 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 BTN2A3PQ96KV6 586 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 MTG2Q9H4K7 406 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 SGK2Q9HBY8 427 aa23.21■■□□□ 1.31
SREBF1-214ENST00000486311 GTPBP10A4D1E9 387 aaKnown RBP23.2■■□□□ 1.3
SREBF1-214ENST00000486311 CER1O95813 267 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 TACR2P21452 398 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 AFF3P51826 1226 aaKnown RBP23.2■■□□□ 1.3
SREBF1-214ENST00000486311 APBA1Q02410 837 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 ARHGAP44Q17R89 818 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 EXOC3L4Q17RC7 722 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 PITRM1Q5JRX3 1037 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 RAP1GAP2Q684P5 730 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 MMS22LQ6ZRQ5 1243 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 CREBRFQ8IUR6 639 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 LGI2Q8N0V4 545 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 SHC3Q92529 594 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 SNX19Q92543 992 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 GAREM1Q9H706 876 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 IL21RQ9HBE5 538 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 OSGEPQ9NPF4 335 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 KIAA1522Q9P206 1035 aaPredicted RBP23.2■■□□□ 1.3
SREBF1-214ENST00000486311 TJP2Q9UDY2 1190 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 SCML1Q9UN30 329 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 MSRB2Q9Y3D2 182 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 SLCO1B1Q9Y6L6 691 aa23.2■■□□□ 1.3
SREBF1-214ENST00000486311 TMEM8BA6NDV4 472 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 SIN3BO75182 1162 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 GLI1P08151 1106 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 USP8P40818 1118 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 MATKP42679 507 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 PITX1P78337 314 aaPredicted RBP23.19■■□□□ 1.3
SREBF1-214ENST00000486311 TAF5Q15542 800 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 HLA-BQ31612 363 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 USP30Q70CQ3 517 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 CHSY1Q86X52 802 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 WDTC1Q8N5D0 677 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 PABPC3Q9H361 631 aaKnown RBP23.19■■□□□ 1.3
SREBF1-214ENST00000486311 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.19■■□□□ 1.3
SREBF1-214ENST00000486311 KLK13Q9UKR3 277 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 PCDHGC3Q9UN70 934 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 ERVW-1Q9UQF0 538 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 PCDHB9Q9Y5E1 797 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 CHD6Q8TD26 2715 aa23.19■■□□□ 1.3
SREBF1-214ENST00000486311 A0A1B0GVT2 93 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 FAM221BA6H8Z2 402 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 CBFA2T3O75081 653 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 MOCS3O95396 460 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 SRPRAP08240 638 aaKnown RBP23.18■■□□□ 1.3
SREBF1-214ENST00000486311 PON1P27169 355 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 CTSOP43234 321 aaPredicted RBP23.18■■□□□ 1.3
SREBF1-214ENST00000486311 RAB44Q7Z6P3 723 aaPredicted RBP23.18■■□□□ 1.3
SREBF1-214ENST00000486311 ATP6V0D2Q8N8Y2 350 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 MLKLQ8NB16 471 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 BIRC7Q96CA5 298 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 PPP1R13BQ96KQ4 1090 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 SLC2A13Q96QE2 648 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 CPXM1Q96SM3 734 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 ASNSD1Q9NWL6 643 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 ZMIZ1Q9ULJ6 1067 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 NCKAP1Q9Y2A7 1128 aa23.18■■□□□ 1.3
SREBF1-214ENST00000486311 FNDC3AQ9Y2H6 1198 aaKnown RBP23.18■■□□□ 1.3
SREBF1-214ENST00000486311 AKAP13Q12802 2813 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 TARSL2A2RTX5 802 aaKnown RBP23.17■■□□□ 1.3
SREBF1-214ENST00000486311 KCNU1A8MYU2 1149 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 RNASEH1O60930 286 aaKnown RBP23.17■■□□□ 1.3
SREBF1-214ENST00000486311 CD27P26842 260 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 CSNK1EP49674 416 aaKnown RBP23.17■■□□□ 1.3
SREBF1-214ENST00000486311 CDK17Q00537 523 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 ECT2LQ008S8 904 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 C9orf64Q5T6V5 341 aa23.17■■□□□ 1.3
SREBF1-214ENST00000486311 DHX40Q8IX18 779 aaKnown RBP23.17■■□□□ 1.3
SREBF1-214ENST00000486311 DEFB106AQ8N104 65 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms