RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 FYB2Q5VWT5 728 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 TRIM67Q6ZTA4 783 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 SUGP1Q8IWZ8 645 aaKnown RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 RNF10Q8N5U6 811 aaKnown RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 ARFGAP1Q8N6T3 406 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 TPCN2Q8NHX9 752 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 KIAA1524Q8TCG1 905 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 TEKT4Q8WW24 435 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 ALS2CR12Q96Q35 445 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 PEBP4Q96S96 227 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 PNKPQ96T60 521 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 COL25A1Q9BXS0 654 aaPredicted RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 SLC2A11Q9BYW1 496 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 ZYG11BQ9C0D3 744 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 KCNF1Q9H3M0 494 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 ANLNQ9NQW6 1124 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 ARHGEF4Q9NR80 690 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUP50-216ENST00000486184 GPATCH2LQ9NWQ4 482 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 NDRG2Q9UN36 371 aaKnown RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUP50-216ENST00000486184 SNX10Q9Y5X0 201 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 DUSP10Q9Y6W6 482 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.74□□□□□ -0.53
NUP50-216ENST00000486184 KANSL1LA0AUZ9 987 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 KRBA1A5PL33 1030 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 PI4K2BG5E9Z4 385 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 H3BRJ5 948 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 I6L893 689 aaPredicted RBP11.74□□□□□ -0.53
NUP50-216ENST00000486184 NCAM2O15394 837 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 TULP3O75386 442 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 CLDN11O75508 207 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 MOCS3O95396 460 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 RARAP10276 462 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 COMTP21964 271 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 EPHB2P29323 1055 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 L1CAMP32004 1257 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 HTR7P34969 479 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 ZNF135P52742 658 aaPredicted RBP11.74□□□□□ -0.53
NUP50-216ENST00000486184 CDH4P55283 916 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 OXCT1P55809 520 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 SLC25A11Q02978 314 aaKnown RBP11.74□□□□□ -0.53
NUP50-216ENST00000486184 ZNF177Q13360 481 aaPredicted RBP11.74□□□□□ -0.53
NUP50-216ENST00000486184 LRRC32Q14392 662 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 KCNT1Q5JUK3 1230 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 CHST9Q7L1S5 443 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 POLNQ7Z5Q5 900 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 C14orf80Q86SX3 495 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 C12orf40Q86WS4 652 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 MAP7D3Q8IWC1 876 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 RHOT1Q8IXI2 618 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 CCAR2Q8N163 923 aaKnown RBP11.74□□□□□ -0.53
NUP50-216ENST00000486184 PYROXD2Q8N2H3 581 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 KCTD6Q8NC69 237 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 FLCNQ8NFG4 579 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 CCDC26Q8TAB7 109 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 IGSF8Q969P0 613 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 NELL2Q99435 816 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 CATSPERBQ9H7T0 1116 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 TBC1D17Q9HA65 648 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 PPARGC1AQ9UBK2 798 aaKnown RBP11.74□□□□□ -0.53
NUP50-216ENST00000486184 TRIM10Q9UDY6 481 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 ALG6Q9Y672 507 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 UNC80Q8N2C7 3258 aa11.74□□□□□ -0.53
NUP50-216ENST00000486184 BDP1A6H8Y1 2624 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 TBC1D3BA6NDS4 549 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 TMEM221A6NGB7 291 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 M0R296 226 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 GFRA2O00451 464 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 FGF10O15520 208 aaPredicted RBP11.73□□□□□ -0.53
NUP50-216ENST00000486184 PSTPIP1O43586 416 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 LRIG2O94898 1065 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 KAT7O95251 611 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 KRT1P04264 644 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 RHOCP08134 193 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 TCF4P15884 667 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 DRD1P21728 446 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 CD72P21854 359 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 IL1R2P27930 398 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 OR1E1P30953 314 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 OPRD1P41143 372 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 GRIA2P42262 883 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 SLC6A11P48066 632 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 GALK1P51570 392 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 CDH6P55285 790 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 STARD6P59095 220 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 TAS2R40P59535 323 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 C5orf22Q49AR2 442 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 C6orf118Q5T5N4 469 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 TXNDC11Q6PKC3 985 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 PEX26Q7Z412 305 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 ANKS1BQ7Z6G8 1248 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 TFAP2DQ7Z6R9 452 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 CIR1Q86X95 450 aaPredicted RBP11.73□□□□□ -0.53
NUP50-216ENST00000486184 ETFBKMTQ8IXQ9 262 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 UCMAQ8WVF2 138 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 TRIM44Q96DX7 344 aaPredicted RBP11.73□□□□□ -0.53
NUP50-216ENST00000486184 CHFRQ96EP1 664 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 KCTD15Q96SI1 283 aaPredicted RBP11.73□□□□□ -0.53
NUP50-216ENST00000486184 RETREG1Q9H6L5 497 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms