RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 PDGFRLQ15198 375 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 AAK1Q2M2I8 961 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 ALFQ53S48 1182 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 ANKRD20A8PQ5CZ79 823 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 TFDP3Q5H9I0 405 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 SLC9A4Q6AI14 798 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 AADACL2Q6P093 401 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 CHSY1Q86X52 802 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 TMEM25Q86YD3 366 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 LGI2Q8N0V4 545 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 SLC44A3Q8N4M1 653 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 ST13P5Q8NFI4 369 aaPredicted RBP16.33■□□□□ 0.2
APOE-205ENST00000485628 RSAD2Q8WXG1 361 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 IRF7Q92985 503 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
APOE-205ENST00000485628 RBM41Q96IZ5 413 aaKnown RBP16.33■□□□□ 0.2
APOE-205ENST00000485628 LMLNQ96KR4 655 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 OSBPL9Q96SU4 736 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 EPAS1Q99814 870 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 ARHGEF4Q9NR80 690 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 TMEM248Q9NWD8 314 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 DUS2Q9NX74 493 aaKnown RBP16.33■□□□□ 0.2
APOE-205ENST00000485628 LIMD1Q9UGP4 676 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 DNAI1Q9UI46 699 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 VANGL2Q9ULK5 521 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 NUP205Q92621 2012 aa16.33■□□□□ 0.2
APOE-205ENST00000485628 LRRD1A4D1F6 860 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 CTAGE9A4FU28 777 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 F5H5T6 163 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 EEF2KO00418 725 aaKnown RBP16.32■□□□□ 0.2
APOE-205ENST00000485628 HOXC11O43248 304 aaPredicted RBP16.32■□□□□ 0.2
APOE-205ENST00000485628 CNTN5O94779 1100 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 KRT1P04264 644 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 TNNT1P13805 278 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 RHOQP17081 205 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 HOXD9P28356 352 aaPredicted RBP16.32■□□□□ 0.2
APOE-205ENST00000485628 RPS24P62847 133 aaKnown RBP16.32■□□□□ 0.2
APOE-205ENST00000485628 DHCR24Q15392 516 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 PPP6R3Q5H9R7 873 aaPredicted RBP16.32■□□□□ 0.2
APOE-205ENST00000485628 TTC39BQ5VTQ0 682 aaPredicted RBP16.32■□□□□ 0.2
APOE-205ENST00000485628 AFMIDQ63HM1 303 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 CHST9Q7L1S5 443 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 COG1Q8WTW3 980 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 TBC1D31Q96DN5 1066 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 CHFRQ96EP1 664 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 TMA16Q96EY4 203 aaKnown RBP16.32■□□□□ 0.2
APOE-205ENST00000485628 PBKQ96KB5 322 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 RPGRIP1Q96KN7 1286 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 TRMT61BQ9BVS5 477 aaKnown RBP16.32■□□□□ 0.2
APOE-205ENST00000485628 ZYG11BQ9C0D3 744 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 ETNK2Q9NVF9 386 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 THG1LQ9NWX6 298 aaKnown RBP16.32■□□□□ 0.2
APOE-205ENST00000485628 TBC1D30Q9Y2I9 924 aa16.32■□□□□ 0.2
APOE-205ENST00000485628 H3BRJ5 948 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 KCNK3O14649 394 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 TRDMT1O14717 391 aaKnown RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 FGF10O15520 208 aaPredicted RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 CREB3O43889 395 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 SRGAP2O75044 1071 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 CYP17A1P05093 508 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 ARSAP15289 507 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 TCP1P17987 556 aaKnown RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 ERCC2P18074 760 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 AMPD1P23109 780 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 SP100P23497 879 aaPredicted RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 GJC1P36383 396 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 ARL4AP40617 200 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 VCPP55072 806 aaKnown RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 CDH4P55283 916 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 ZNF211Q13398 564 aaPredicted RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 PAFAH1B3Q15102 231 aaKnown RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 MPPE1Q53F39 396 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 LY6G5CQ5SRR4 150 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 TRIM68Q6AZZ1 485 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 LRRC31Q6UY01 552 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 KIAA0907Q7Z7F0 614 aaPredicted RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 ETFBKMTQ8IXQ9 262 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 UMODL1-AS1Q8N2C9 162 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 PLD5Q8N7P1 536 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 RTL3Q8N8U3 475 aaKnown RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 ZFYVE19Q96K21 471 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 OSBPL8Q9BZF1 889 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 NOL6Q9H6R4 1146 aaKnown RBP16.31■□□□□ 0.2
APOE-205ENST00000485628 NDFIP2Q9NV92 336 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 MPP6Q9NZW5 540 aa16.31■□□□□ 0.2
APOE-205ENST00000485628 A0A1B0GVM2 712 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 TCAF2A6NFQ2 919 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 CACNG3O60359 315 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 CLDN11O75508 207 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 EPHB2P29323 1055 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 CASQ1P31415 396 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 TPI1P60174 286 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 GRM2Q14416 872 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 KRT81Q14533 505 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 SIX1Q15475 284 aaPredicted RBP16.3■□□□□ 0.2
APOE-205ENST00000485628 RABGAP1LQ5R372 815 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 CXorf57Q6NSI4 855 aaKnown RBP16.3■□□□□ 0.2
APOE-205ENST00000485628 BBS12Q6ZW61 710 aa16.3■□□□□ 0.2
APOE-205ENST00000485628 CREG2Q8IUH2 290 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms