RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 FAF2Q96CS3 445 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 CSPG4P5Q96PW8 444 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 PSMB7Q99436 277 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 SPHK2Q9NRA0 654 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 STIM2Q9P246 746 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 IGSF9Q9P2J2 1179 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 SNX12Q9UMY4 172 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 NEU3Q9UQ49 428 aa18.13■□□□□ 0.49
CHMP3-207ENST00000485465 C5orf42Q9H799 3197 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 DAPK3O43293 454 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 NFATC1O95644 943 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 ARSAP15289 507 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 EPHB2P29323 1055 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 GDI1P31150 447 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 CETN2P41208 172 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 IRAK1P51617 712 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 RPS24P62847 133 aaKnown RBP18.12■□□□□ 0.49
CHMP3-207ENST00000485465 DPYSQ14117 519 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 ANKRD20A8PQ5CZ79 823 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 TTC39BQ5VTQ0 682 aaPredicted RBP18.12■□□□□ 0.49
CHMP3-207ENST00000485465 PAPD7Q5XG87 772 aaKnown RBP18.12■□□□□ 0.49
CHMP3-207ENST00000485465 RHBDF2Q6PJF5 856 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 TMEM25Q86YD3 366 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 HJURPQ8NCD3 748 aaPredicted RBP18.12■□□□□ 0.49
CHMP3-207ENST00000485465 ATP2A3Q93084 1043 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 ZYG11BQ9C0D3 744 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 CARD9Q9H257 536 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 EBF3Q9H4W6 596 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 MPP6Q9NZW5 540 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 PRUNE2Q8WUY3 3088 aa18.12■□□□□ 0.49
CHMP3-207ENST00000485465 FGF10O15520 208 aaPredicted RBP18.11■□□□□ 0.49
CHMP3-207ENST00000485465 TBL1XO60907 577 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 CNTN5O94779 1100 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 CYBBP04839 570 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 CYP17A1P05093 508 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 PRLRP16471 622 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 RHOQP17081 205 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 AMPD1P23109 780 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 CXCR5P32302 372 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 PTPN7P35236 360 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 ZP2Q05996 745 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 DHCR24Q15392 516 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 PPP2R5EQ16537 467 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 ALFQ53S48 1182 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 TFDP3Q5H9I0 405 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 LY6G5CQ5SRR4 150 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 MPP7Q5T2T1 576 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 FYB2Q5VWT5 728 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 AADACL2Q6P093 401 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 CIR1Q86X95 450 aaPredicted RBP18.11■□□□□ 0.49
CHMP3-207ENST00000485465 SLC44A3Q8N4M1 653 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 PCDH19Q8TAB3 1148 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 DDI1Q8WTU0 396 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 P2RY11Q96G91 374 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 PBKQ96KB5 322 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 RNF157Q96PX1 679 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 OSBPL9Q96SU4 736 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 MAK16Q9BXY0 300 aaKnown RBP18.11■□□□□ 0.49
CHMP3-207ENST00000485465 CATSPERBQ9H7T0 1116 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 HPS4Q9NQG7 708 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 ARHGEF4Q9NR80 690 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 MARK1Q9P0L2 795 aa18.11■□□□□ 0.49
CHMP3-207ENST00000485465 hCG_1818297A0A087WSY0 165 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 TYW5A2RUC4 315 aaKnown RBP18.1■□□□□ 0.49
CHMP3-207ENST00000485465 WASH4PA8MWX3 477 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 ADH1CP00326 375 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 PENKP01210 267 aaPredicted RBP18.1■□□□□ 0.49
CHMP3-207ENST00000485465 ASGR2P07307 311 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 KRT10P13645 584 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 TCP1P17987 556 aaKnown RBP18.1■□□□□ 0.49
CHMP3-207ENST00000485465 ERCC2P18074 760 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 CDH4P55283 916 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 TNK2Q07912 1038 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 RUNX3Q13761 415 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 LLGL1Q15334 1064 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 SEL1L2Q5TEA6 688 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 NLRP14Q86W24 1093 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 RFX6Q8HWS3 928 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 PQLC3Q8N755 202 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 ASB2Q96Q27 587 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 BBS2Q9BXC9 721 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 OSBPL8Q9BZF1 889 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 RETREG1Q9H6L5 497 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 BRD9Q9H8M2 597 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 ECT2Q9H8V3 914 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 EFR3BQ9Y2G0 817 aa18.1■□□□□ 0.49
CHMP3-207ENST00000485465 KIF26AQ9ULI4 1882 aaPredicted RBP18.09■□□□□ 0.49
CHMP3-207ENST00000485465 A0A1B0GVM2 712 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 TCAF2A6NFQ2 919 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 ARNTLO00327 626 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 CES2O00748 559 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 DCLK1O15075 740 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 CEP104O60308 925 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 CLDN11O75508 207 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 ADH5P11766 374 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 BMP1P13497 986 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 HOXD9P28356 352 aaPredicted RBP18.09■□□□□ 0.49
CHMP3-207ENST00000485465 GAD2Q05329 585 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 ANO4Q32M45 955 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 KAZNQ674X7 775 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms