RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 SERPINA13PQ6UXR4 307 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 FAM131BQ86XD5 332 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 MCOLN2Q8IZK6 566 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.77■□□□□ 0.76
SNX17-206ENST00000484886 CYB5D2Q8WUJ1 264 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 PRMT1Q99873 361 aaKnown RBP19.77■□□□□ 0.76
SNX17-206ENST00000484886 GABRG3Q99928 467 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 SYT11Q9BT88 431 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.77■□□□□ 0.76
SNX17-206ENST00000484886 ARHGEF38Q9NXL2 777 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 CAPN11Q9UMQ6 739 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 INVSQ9Y283 1065 aa19.77■□□□□ 0.76
SNX17-206ENST00000484886 C2CD4BA6NLJ0 364 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 SYNCRIPO60506 623 aaKnown RBP19.76■□□□□ 0.75
SNX17-206ENST00000484886 MOCS3O95396 460 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 ATP5BP06576 529 aaKnown RBP19.76■□□□□ 0.75
SNX17-206ENST00000484886 GPD1P21695 349 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 RFC1P35251 1148 aaPredicted RBP19.76■□□□□ 0.75
SNX17-206ENST00000484886 IL12RB1P42701 662 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 GSCP56915 257 aaPredicted RBP19.76■□□□□ 0.75
SNX17-206ENST00000484886 LMAN2Q12907 356 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 ZNF234Q14588 700 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 FUT11Q495W5 492 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 CCDC14Q49A88 953 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 RNF43Q68DV7 783 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 VPS36Q86VN1 386 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 CCAR2Q8N163 923 aaKnown RBP19.76■□□□□ 0.75
SNX17-206ENST00000484886 MCEEQ96PE7 176 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 TMPRSS4Q9NRS4 437 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 KIAA1522Q9P206 1035 aaPredicted RBP19.76■□□□□ 0.75
SNX17-206ENST00000484886 GMEB2Q9UKD1 530 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 SNX10Q9Y5X0 201 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 ITIH6Q6UXX5 1313 aa19.76■□□□□ 0.75
SNX17-206ENST00000484886 A0A1B0GVM2 712 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 A0A1W2PQF6 199 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 TCAF2A6NFQ2 919 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 SIGLEC16A6NMB1 481 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 GYPCP04921 128 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 DESP17661 470 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 RRM1P23921 792 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 CASP14P31944 242 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 PTPN9P43378 593 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 ARL13BQ3SXY8 428 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 KIAA1211LQ6NV74 962 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 WDR59Q6PJI9 974 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 LRRC31Q6UY01 552 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 C14orf80Q86SX3 495 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 ADIPOR2Q86V24 386 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 RASSF3Q86WH2 238 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 FAM172AQ8WUF8 416 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 RUBCNQ92622 972 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 SYN2Q92777 582 aaPredicted RBP19.75■□□□□ 0.75
SNX17-206ENST00000484886 IGSF8Q969P0 613 aa19.75■□□□□ 0.75
SNX17-206ENST00000484886 BZW2Q9Y6E2 419 aaKnown RBP19.75■□□□□ 0.75
SNX17-206ENST00000484886 EML5Q05BV3 1969 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.74■□□□□ 0.75
SNX17-206ENST00000484886 DDX3XO00571 662 aaKnown RBP eCLIP19.74■□□□□ 0.753e-25■■■□□ 19.2
SNX17-206ENST00000484886 DCLK1O15075 740 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 ATMINO43313 823 aaPredicted RBP19.74■□□□□ 0.75
SNX17-206ENST00000484886 FTLP02792 175 aaPredicted RBP19.74■□□□□ 0.75
SNX17-206ENST00000484886 SERPING1P05155 500 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 EPHX1P07099 455 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 TPM1P09493 284 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 GABRG2P18507 467 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 CSKP41240 450 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 ZNF177Q13360 481 aaPredicted RBP19.74■□□□□ 0.75
SNX17-206ENST00000484886 FSCBQ5H9T9 825 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 SH3PXD2AQ5TCZ1 1133 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 SPECC1LQ69YQ0 1117 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 LAIR1Q6GTX8 287 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 KIAA0907Q7Z7F0 614 aaPredicted RBP19.74■□□□□ 0.75
SNX17-206ENST00000484886 KBTBD6Q86V97 674 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 DNAAF5Q86Y56 855 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 OLIG1Q8TAK6 271 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 VCPIP1Q96JH7 1222 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 SPACA7Q96KW9 195 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 ANLNQ9NQW6 1124 aa19.74■□□□□ 0.75
SNX17-206ENST00000484886 SRGAP2O75044 1071 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 DLDP09622 509 aaKnown RBP19.73■□□□□ 0.75
SNX17-206ENST00000484886 HLA-EP13747 358 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 PRKCHP24723 683 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 NUMBP49757 651 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 IRAK1P51617 712 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 ST8SIA6P61647 398 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 TRIM14Q14142 442 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 RAB6CQ53S08 254 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 PITRM1Q5JRX3 1037 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 ACBD5Q5T8D3 534 aaPredicted RBP19.73■□□□□ 0.75
SNX17-206ENST00000484886 RNF219Q5W0B1 726 aaPredicted RBP19.73■□□□□ 0.75
SNX17-206ENST00000484886 KIAA1324Q6UXG2 1013 aaKnown RBP19.73■□□□□ 0.75
SNX17-206ENST00000484886 STRADAQ7RTN6 431 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 FAM160A2Q8N612 972 aaPredicted RBP19.73■□□□□ 0.75
SNX17-206ENST00000484886 RLN3Q8WXF3 142 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 ZNF653Q96CK0 615 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 RAB6CQ9H0N0 254 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 PARVAQ9NVD7 372 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 MYO15AQ9UKN7 3530 aa19.73■□□□□ 0.75
SNX17-206ENST00000484886 VPS13AQ96RL7 3174 aa19.72■□□□□ 0.75
SNX17-206ENST00000484886 E9PAM4 449 aa19.72■□□□□ 0.75
SNX17-206ENST00000484886 I6L893 689 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms