RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 CELA2AP08217 269 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 HOXD12P35452 270 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 RBM5P52756 815 aaKnown RBP eCLIP7.41□□□□□ -1.22
UBR3-210ENST00000484596 TUBA4AP68366 448 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 DDX10Q13206 875 aaKnown RBP7.41□□□□□ -1.22
UBR3-210ENST00000484596 PROSER3Q2NL68 480 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 PAPD7Q5XG87 772 aaKnown RBP7.41□□□□□ -1.22
UBR3-210ENST00000484596 RANBP10Q6VN20 620 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 KYAT3Q6YP21 454 aaKnown RBP7.41□□□□□ -1.22
UBR3-210ENST00000484596 C2CD5Q86YS7 1000 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 TMEM57Q8N5G2 664 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 SLC2A12Q8TD20 617 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 TRMT61AQ96FX7 289 aaKnown RBP7.41□□□□□ -1.22
UBR3-210ENST00000484596 ZNF845Q96IR2 970 aaPredicted RBP7.41□□□□□ -1.22
UBR3-210ENST00000484596 RITA1Q96K30 269 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 PPM1MQ96MI6 270 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 PIGSQ96S52 555 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 TRIM2Q9C040 744 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 NUAK2Q9H093 628 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 FEM1BQ9UK73 627 aa7.41□□□□□ -1.22
UBR3-210ENST00000484596 CYP3A7-CYP3A51PA0A087WV96 503 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 RNF8O76064 485 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 BDNFP23560 247 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 CYP3A7P24462 503 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 NDUFS1P28331 727 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 AGTR2P50052 363 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 GEMIN4P57678 1058 aaKnown RBP7.4□□□□□ -1.22
UBR3-210ENST00000484596 TAS2R50P59544 299 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 TMEM119Q4V9L6 283 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 SLC39A5Q6ZMH5 540 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 ANKS1BQ7Z6G8 1248 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 GLCCI1Q86VQ1 547 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 CHSY1Q86X52 802 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 FSIP1Q8NA03 581 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 PNLDC1Q8NA58 520 aaKnown RBP7.4□□□□□ -1.22
UBR3-210ENST00000484596 SEMA6DQ8NFY4 1073 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 SKA1Q96BD8 255 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 NPAS1Q99742 590 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 NOD2Q9HC29 1040 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 RASSF1Q9NS23 344 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 ARL8BQ9NVJ2 186 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 SWAP70Q9UH65 585 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 SPATA31A5Q5VU36 1347 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 SPATA31A7Q8IWB4 1347 aa7.4□□□□□ -1.22
UBR3-210ENST00000484596 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.39□□□□□ -1.23
UBR3-210ENST00000484596 LINC01548A6NM66 108 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 B9A039 149 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 J3KRW8 73 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 USP12O75317 370 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 KRT38O76015 456 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 IGFBP2P18065 325 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 SFPQP23246 707 aaKnown RBP eCLIP7.39□□□□□ -1.23
UBR3-210ENST00000484596 VPS41P49754 854 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 RCAN1P53805 252 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 FOXL2P58012 376 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 KRTAP10-11P60412 298 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 DCTN1Q14203 1278 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 INTS11Q5TA45 600 aaKnown RBP7.39□□□□□ -1.23
UBR3-210ENST00000484596 KIAA1614Q5VZ46 1190 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 RASGRP2Q7LDG7 609 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 HERC6Q8IVU3 1022 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 CSGALNACT1Q8TDX6 532 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 P2RY11Q96G91 374 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 ABHD16BQ9H3Z7 469 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 SFXN1Q9H9B4 322 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 ASNSD1Q9NWL6 643 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 KCND3Q9UK17 655 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 CRYL1Q9Y2S2 319 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 DERAQ9Y315 318 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 PCDHA10Q9Y5I2 948 aa7.39□□□□□ -1.23
UBR3-210ENST00000484596 FAM90A20PA6NIJ5 464 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 PRYO14603 147 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 ENO1P06733 434 aaKnown RBP7.38□□□□□ -1.23
UBR3-210ENST00000484596 TNFAIP3P21580 790 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 MAN1A1P33908 653 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 STAT6P42226 847 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 FAM3BP58499 235 aaPredicted RBP7.38□□□□□ -1.23
UBR3-210ENST00000484596 SLC14A1Q13336 389 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 GAB1Q13480 694 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 GPR162Q16538 588 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 FAM110CQ1W6H9 321 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 ZNF782Q6ZMW2 699 aaPredicted RBP7.38□□□□□ -1.23
UBR3-210ENST00000484596 SYT13Q7L8C5 426 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 MAATS1Q7Z4T9 603 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 UEVLDQ8IX04 471 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 PTGR2Q8N8N7 351 aaPredicted RBP7.38□□□□□ -1.23
UBR3-210ENST00000484596 SMG7Q92540 1137 aaKnown RBP7.38□□□□□ -1.23
UBR3-210ENST00000484596 HTATIP2Q9BUP3 242 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 CHODLQ9H9P2 273 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 FLRT1Q9NZU1 646 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 B3GNT3Q9Y2A9 372 aa7.38□□□□□ -1.23
UBR3-210ENST00000484596 WDR91A4D1P6 747 aa7.37□□□□□ -1.23
UBR3-210ENST00000484596 SAC3D1A6NKF1 404 aa7.37□□□□□ -1.23
UBR3-210ENST00000484596 EYA2O00167 538 aa7.37□□□□□ -1.23
UBR3-210ENST00000484596 CYP2A6P11509 494 aaPredicted RBP7.37□□□□□ -1.23
UBR3-210ENST00000484596 TACR3P29371 465 aa7.37□□□□□ -1.23
UBR3-210ENST00000484596 ZNF81P51508 661 aa7.37□□□□□ -1.23
UBR3-210ENST00000484596 ZNF84P51523 738 aa7.37□□□□□ -1.23
UBR3-210ENST00000484596 FOXD4Q12950 439 aaPredicted RBP7.37□□□□□ -1.23
UBR3-210ENST00000484596 CTXN3Q4LDR2 81 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms