RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 SEC13P55735 322 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 OGDHQ02218 1023 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 CDH18Q13634 790 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 CRY1Q16526 586 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 SLC18A3Q16572 532 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 C2orf27AQ580R0 203 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 EGFLAMQ63HQ2 1017 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
UPF3A-208ENST00000484246 DCUN1D2Q6PH85 259 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 TMC6Q7Z403 805 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 ADIPOR2Q86V24 386 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 ALLCQ8N6M5 410 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 FAM172AQ8WUF8 416 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 ZNF653Q96CK0 615 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 CD248Q9HCU0 757 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 MRPL47Q9HD33 250 aaKnown RBP16.41■□□□□ 0.22
UPF3A-208ENST00000484246 ABCB8Q9NUT2 735 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 ELOVL2Q9NXB9 296 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 THAP10Q9P2Z0 257 aaPredicted RBP16.41■□□□□ 0.22
UPF3A-208ENST00000484246 EBF1Q9UH73 591 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 SLC8A2Q9UPR5 921 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 DRGXA6NNA5 263 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 AKR1B15C9JRZ8 316 aaPredicted RBP16.4■□□□□ 0.22
UPF3A-208ENST00000484246 SGK1O00141 431 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 ATMINO43313 823 aaPredicted RBP16.4■□□□□ 0.22
UPF3A-208ENST00000484246 KLF8O95600 359 aaPredicted RBP16.4■□□□□ 0.22
UPF3A-208ENST00000484246 APBB3O95704 486 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 DESP17661 470 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 NTSR1P30989 418 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 ADRA1BP35368 520 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 TIE1P35590 1138 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 EIF4A3P38919 411 aaKnown RBP16.4■□□□□ 0.22
UPF3A-208ENST00000484246 OXCT1P55809 520 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 SLC12A1Q13621 1099 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 TSR1Q2NL82 804 aaKnown RBP16.4■□□□□ 0.22
UPF3A-208ENST00000484246 ARL13BQ3SXY8 428 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 SH3PXD2AQ5TCZ1 1133 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 EMC10Q5UCC4 262 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 MANEALQ5VSG8 457 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 TSSK4Q6SA08 328 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 WDR5BQ86VZ2 330 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 RASSF3Q86WH2 238 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 TXNDC5Q8NBS9 432 aaKnown RBP16.4■□□□□ 0.22
UPF3A-208ENST00000484246 UCMAQ8WVF2 138 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 ATOH1Q92858 354 aaPredicted RBP16.4■□□□□ 0.22
UPF3A-208ENST00000484246 IGSF8Q969P0 613 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 RPRD1AQ96P16 312 aaPredicted RBP16.4■□□□□ 0.22
UPF3A-208ENST00000484246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.4■□□□□ 0.22
UPF3A-208ENST00000484246 OSBPL2Q9H1P3 480 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 SEMA4AQ9H3S1 761 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 RETREG1Q9H6L5 497 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 VANGL2Q9ULK5 521 aa16.4■□□□□ 0.22
UPF3A-208ENST00000484246 PIEZO1Q92508 2521 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 CLDN11O75508 207 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 CYP1A2P05177 515 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 C7P10643 843 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 CD70P32970 193 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 CDH4P55283 916 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 ZNF252P-AS1Q0IIN9 211 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 LMAN2Q12907 356 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 CDO1Q16878 200 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 RAB6CQ53S08 254 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 CXorf57Q6NSI4 855 aaKnown RBP16.39■□□□□ 0.21
UPF3A-208ENST00000484246 C14orf80Q86SX3 495 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 LONP2Q86WA8 852 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 CCDC117Q8IWD4 279 aaPredicted RBP16.39■□□□□ 0.21
UPF3A-208ENST00000484246 CCAR2Q8N163 923 aaKnown RBP16.39■□□□□ 0.21
UPF3A-208ENST00000484246 CFAP52Q8N1V2 620 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 TC2NQ8N9U0 490 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 KDM1BQ8NB78 822 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 TTC17Q96AE7 1141 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 NCAPGQ9BPX3 1015 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 RAB6CQ9H0N0 254 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 KIAA1522Q9P206 1035 aaPredicted RBP16.39■□□□□ 0.21
UPF3A-208ENST00000484246 STIM2Q9P246 746 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 PPARGC1AQ9UBK2 798 aaKnown RBP16.39■□□□□ 0.21
UPF3A-208ENST00000484246 TBC1D30Q9Y2I9 924 aa16.39■□□□□ 0.21
UPF3A-208ENST00000484246 ASLP04424 464 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 FECHP22830 423 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 CNR2P34972 360 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 PLK1P53350 603 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 ADKP55263 362 aaKnown RBP16.38■□□□□ 0.21
UPF3A-208ENST00000484246 ACAP1Q15027 740 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 FUT11Q495W5 492 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 FSCBQ5H9T9 825 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 CCDC122Q5T0U0 273 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 MBLAC2Q68D91 279 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 TMEM92Q6UXU6 159 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 LRRC31Q6UY01 552 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 CHPFQ8IZ52 775 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 CARNMT1Q8N4J0 409 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 CCDC33Q8N5R6 958 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 TSTD1Q8NFU3 115 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 THAP2Q9H0W7 228 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 ZNF212Q9UDV6 495 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 INTS6Q9UL03 887 aaKnown RBP16.38■□□□□ 0.21
UPF3A-208ENST00000484246 NEU3Q9UQ49 428 aa16.38■□□□□ 0.21
UPF3A-208ENST00000484246 A0A1W2PQF6 199 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms