RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 EPHA8P29322 1005 aaPredicted RBP13.39□□□□□ -0.27
UBR4-213ENST00000483922 SLC8A1P32418 973 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 CSKP41240 450 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 NXPH1P58417 271 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 INSM1Q01101 510 aaPredicted RBP13.39□□□□□ -0.27
UBR4-213ENST00000483922 ADIGQ0VDE8 80 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 CST6Q15828 149 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 GOLGA7BQ2TAP0 167 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 ZCWPW2Q504Y3 356 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
UBR4-213ENST00000483922 FAM186BQ8IYM0 893 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 LSM14AQ8ND56 463 aaKnown RBP13.39□□□□□ -0.27
UBR4-213ENST00000483922 OR2T34Q8NGX1 318 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 FIBINQ8TAL6 211 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 CLEC4CQ8WTT0 213 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 GOLGA1Q92805 767 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 ZSWIM1Q9BR11 485 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 UPF2Q9HAU5 1272 aaKnown RBP13.39□□□□□ -0.27
UBR4-213ENST00000483922 RAB20Q9NX57 234 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 FAM13BQ9NYF5 915 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 STIM2Q9P246 746 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 NCKAP1Q9Y2A7 1128 aa13.39□□□□□ -0.27
UBR4-213ENST00000483922 A0A1B0GVL5 298 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 TLR4O00206 839 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 CALUO43852 315 aaPredicted RBP13.38□□□□□ -0.27
UBR4-213ENST00000483922 BRINP1O60477 761 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 ACSL4O60488 711 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 ATP5BP06576 529 aaKnown RBP13.38□□□□□ -0.27
UBR4-213ENST00000483922 VAV1P15498 845 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 ME1P48163 572 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 RXRGP48443 463 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 CCR5P51681 352 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 DAOAP59103 153 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 PPP2CBP62714 309 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 RPS24P62847 133 aaKnown RBP13.38□□□□□ -0.27
UBR4-213ENST00000483922 PPP2CAP67775 309 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 TLE3Q04726 772 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 ADAM9Q13443 819 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 PKP1Q13835 747 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 ARID5BQ14865 1188 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 TTC31Q49AM3 519 aaPredicted RBP13.38□□□□□ -0.27
UBR4-213ENST00000483922 MPP7Q5T2T1 576 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 KRT39Q6A163 491 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 MSANTD2Q6P1R3 559 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 ERICH1Q86X53 443 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 UBR7Q8N806 425 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 GANCQ8TET4 914 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 KCTD13Q8WZ19 329 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 TFAP2BQ92481 460 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 FGF11Q92914 225 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 PTPRN2Q92932 1015 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 IMPG2Q9BZV3 1241 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 ABCC13Q9NSE7 274 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 OLA1Q9NTK5 396 aaKnown RBP13.38□□□□□ -0.27
UBR4-213ENST00000483922 RCOR1Q9UKL0 485 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 SCML1Q9UN30 329 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 ERVW-1Q9UQF0 538 aa13.38□□□□□ -0.27
UBR4-213ENST00000483922 RNF225M0QZC1 329 aaPredicted RBP13.37□□□□□ -0.27
UBR4-213ENST00000483922 TRIM38O00635 465 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 LATO43561 262 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 RNASEH2AO75792 299 aaKnown RBP13.37□□□□□ -0.27
UBR4-213ENST00000483922 CALCAP01258 141 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 TRIM21P19474 475 aaKnown RBP13.37□□□□□ -0.27
UBR4-213ENST00000483922 ABCB4P21439 1286 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 DRD3P35462 400 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 PSMC2P35998 433 aaKnown RBP13.37□□□□□ -0.27
UBR4-213ENST00000483922 NUMBP49757 651 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 ADPRHP54922 357 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 ENPEPQ07075 957 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 PROX2Q3B8N5 592 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 INAVAQ3KP66 663 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 CBWD6Q4V339 395 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 CBWD3Q5JTY5 395 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 CBWD5Q5RIA9 395 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 PMF1Q6P1K2 205 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 GPR155Q7Z3F1 870 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 ZNF605Q86T29 641 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 SPACA3Q8IXA5 215 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 CEP57L1Q8IYX8 460 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 APCDD1Q8J025 514 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 CFAP52Q8N1V2 620 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 STK40Q8N2I9 435 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 SLC25A45Q8N413 288 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 DCBLD1Q8N8Z6 715 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 ENGASEQ8NFI3 743 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 RNF139Q8WU17 664 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 SLC35F5Q8WV83 523 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 RFFLQ8WZ73 363 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 FAM131CQ96AQ9 280 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 FAXDC2Q96IV6 333 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 SEMA4CQ9C0C4 833 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 AASDHPPTQ9NRN7 309 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 XPO7Q9UIA9 1087 aaKnown RBP13.37□□□□□ -0.27
UBR4-213ENST00000483922 HPSEQ9Y251 543 aa13.37□□□□□ -0.27
UBR4-213ENST00000483922 O00370 1275 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 RHOBTB3O94955 611 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 GIMD1P0DJR0 217 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 LCP1P13796 627 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 PFKFB1P16118 471 aa13.36□□□□□ -0.27
UBR4-213ENST00000483922 GOT1P17174 413 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms