RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PABPC3Q9H361 631 aaKnown RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 PRORYQ9H606 182 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 AASDHPPTQ9NRN7 309 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 RAB20Q9NX57 234 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 RCOR1Q9UKL0 485 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 GOLGA4Q13439 2230 aaKnown RBP7.68□□□□□ -1.18
CSDE1-206ENST00000483030 CABIN1Q9Y6J0 2220 aa7.68□□□□□ -1.18
CSDE1-206ENST00000483030 SMG1Q96Q15 3661 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 A0A1B0GVL5 298 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 A0A1W2PR77 199 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 LRRC72A6NJI9 287 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 TK2O00142 265 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 XPO1O14980 1071 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 ATXN7O15265 892 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 MID1O15344 667 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 RRP8O43159 456 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 ACSL4O60488 711 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 RNASEH1O60930 286 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 RFPL3O75679 317 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 RNASEH2AO75792 299 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 C1QL1O75973 258 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 LATS1O95835 1130 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 C1SP09871 688 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 ZSCAN22P10073 491 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 CDK4P11802 303 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 LCP1P13796 627 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 CD19P15391 556 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 SLC6A4P31645 630 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 SLC8A1P32418 973 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 CSKP41240 450 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 SLC11A2P49281 568 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 ACADVLP49748 655 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 ST8SIA6P61647 398 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 DNM1Q05193 864 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 ENPEPQ07075 957 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 SFSWAPQ12872 951 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 BNIP3Q12983 259 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 CST6Q15828 149 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 NFIL3Q16649 462 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 HNRNPA1L2Q32P51 320 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 SGO2Q562F6 1265 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 MPP7Q5T2T1 576 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 C9orf64Q5T6V5 341 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 HES3Q5TGS1 186 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 MFN1Q8IWA4 741 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 UNC45BQ8IWX7 931 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 SIX6OS1Q8N1H7 587 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 FBXL13Q8NEE6 735 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 OR2T34Q8NGX1 318 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 FIBINQ8TAL6 211 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 TTC17Q96AE7 1141 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 MYO19Q96H55 970 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 FAXDC2Q96IV6 333 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 LMLNQ96KR4 655 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 OMDQ99983 421 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 GDF3Q9NR23 364 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 ABCC13Q9NSE7 274 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 HESX1Q9UBX0 185 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 TSPAN16Q9UKR8 245 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 INTS6Q9UL03 887 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 SCML1Q9UN30 329 aa7.67□□□□□ -1.18
CSDE1-206ENST00000483030 FLNBO75369 2602 aaKnown RBP7.67□□□□□ -1.18
CSDE1-206ENST00000483030 NUMA1Q14980 2115 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 TTC34A8MYJ7 566 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 TLR4O00206 839 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 PIK3R2O00459 728 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 RHOBTB3O94955 611 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 F13A1P00488 732 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 MYL1P05976 194 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 PFKFB1P16118 471 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 CMA1P23946 247 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 CTSOP43234 321 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 ARRB1P49407 418 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 RGS7P49802 495 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 MXI1P50539 228 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 CCR5P51681 352 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 DAOAP59103 153 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 MCCD1P59942 119 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 RPS24P62847 133 aaKnown RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 BST2Q10589 180 aaKnown RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 RTP5Q14D33 572 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 GLIPR1L2Q4G1C9 344 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 FAM133BQ5BKY9 247 aaKnown RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 FSCBQ5H9T9 825 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 NUGGCQ68CJ6 796 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 ATL3Q6DD88 541 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 NADSYN1Q6IA69 706 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 MSANTD2Q6P1R3 559 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 FBXL19Q6PCT2 694 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 MMS22LQ6ZRQ5 1243 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 PARP9Q8IXQ6 854 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 GUF1Q8N442 669 aaKnown RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 CARNMT1Q8N4J0 409 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 OR14C36Q8NHC7 312 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 KCTD13Q8WZ19 329 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 TSC1Q92574 1164 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 FGF11Q92914 225 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 CCDC47Q96A33 483 aaKnown RBP7.66□□□□□ -1.18
CSDE1-206ENST00000483030 MYEOVQ96EZ4 313 aa7.66□□□□□ -1.18
CSDE1-206ENST00000483030 SERAC1Q96JX3 654 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms